Gene SERP0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0015 
Symbol 
ID3242378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand+ 
Start bp10895 
End bp11581 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content34% 
IMG OID637166668 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_187615 
Protein GI57865968 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAT TGAGAAAAAT CAATCGACAC TTTAAAAATG GAAATGAATC AAATCATATT 
TTGAAAGACA TAGATATTCA TATTGATGAA GGTGAATTTA TTGCTATCAT GGGTCCGTCT 
GGTTCAGGTA AAAGTACGTT AATTAATATC TTGGGATTTA TTGATCGTGG ATATGAAGGA 
GAATACTTTT TTAACAATGA GAATTATCAA AAAAGCTCAG ATAATAAGCT CGCAGAAATT 
CGAAATCATA CTGTAGGTTT CGTCTTTCAG AATTTTAAAT TGATTCAAAA TAACACTATT 
TTAGAAAATG TAAGTATTCC GCTAATTTAT AATGGTTTGA GTAATAAAGC GAGAAAAAGC 
AAAGTTTTAG ACGGACTTCA TGACGTCGGT CTAAAAGGTA AAGAGAATCT CTTACCAAAT 
AAATTGTCAG GAGGGCAGCA ACAACGTGTA GCTATTGCCC GGGCAATTAT TAATGACCCT 
AAGTTTATTA TTGCCGATGA ACCTACTGGC GCTCTTGATT CGAAGACATC TCAAGATATT 
ATGGAGCTTT TCGTAAAACT GAACAAAGAA CAGAATACAA CTATTATTAT GGTAACGCAT 
GATCGTGAAG TGGCGGAAAA AGCTGATCGT ATTATCCATA TTTTGGATGG GCGTGTGCAA 
GAGGAAGAGG TGTTGACACG TGAATAA
 
Protein sequence
MIELRKINRH FKNGNESNHI LKDIDIHIDE GEFIAIMGPS GSGKSTLINI LGFIDRGYEG 
EYFFNNENYQ KSSDNKLAEI RNHTVGFVFQ NFKLIQNNTI LENVSIPLIY NGLSNKARKS 
KVLDGLHDVG LKGKENLLPN KLSGGQQQRV AIARAIINDP KFIIADEPTG ALDSKTSQDI 
MELFVKLNKE QNTTIIMVTH DREVAEKADR IIHILDGRVQ EEEVLTRE