| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2682 |
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| Symbol | |
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| ID | 2739269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2721478 |
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| End bp | 2723448 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637161579 |
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| Product | hypothetical protein |
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| Protein accession | NP_973280 |
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| Protein GI | 42528182 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.254687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAGGC TTAATCAAAT ACAGGAAAAA ATGTCTGAAA TGCACGAACT GGATTCCGGG
CGTTTTTTTG TTGATATAAG CGGAGAAACC CTTGATGAGG CCCTTGCAAA CGCAGCTATA
CAATTAGGTA TGCCCGTTTC ATCGATAGAC TATGAGATTC TGCAAAAAGG TGCTTCAGGT
TTTTTTGCTA TAGTTCCAAA AGAATGGAAG ATAAGAGCCT ACGAAACCGT AAAAGTAAAG
AAGCCGCAAA ATATCGAAGA CGAAAAGGTT GAGACCGAAG ATATAATTGA AGATGGAACT
GTTATTAATA AAGACGGAAT GGGATATGTT TTCTGTGCAG CCGACGGTAT TTACTTTAAG
GTAACTGCTC CCTCAGGTAC GGGCCATGCT TTCGATATAA AGGCTGCCAG AAACAAGTTT
AGGGACAGGG CTCTCCCCAT TCCGGAGGAC GATATTCTTA ATCCCATATT GGAGGAGAAA
ACCGGAGAGT ATGTCAGGGT TGCTCCTTAT AAACGAATCC CGGGCAATGA TGCTGCAATG
GTTGTCAACA TAAGCGATGA CGAAATGAAG GCTTATCTTT ATGTTACACC CCCGACAACC
GGAGGCGTCG ATCTTTCCGC AGATACCATT ATCGCATTCT TAAAGAATAA CAGGATAATA
GTCGGAATAA ATGAAGAGAG GGTCAAACAA TTCCAAGATT CTCCCGTTTA TCGTGAAGAT
TATCTGGTAG CGGAAGGCAT AGCTCCTCAA AACGGAGCCG ATGCAAAGAT TATTTATAAT
TTTGAGGTAG ATAATACACG GGTCCGCTTG CAGGAAACCC GTTCCGGGCA AATCAATTTT
AAGGAATTAA ATCTTATTCA AAACGTTGTT GAAGGACAGC CTGTAGCTCA AAAGGTCCCG
GCTCAAAGAG GAAAGGCGGG AAAAACCGTT ACAGGAAAAT ATCTTGAGGC CCTTAACGGA
AAAGATGTTG CAATGCCCGT GGGCAAAAAT ACAAAGATTG CTGCGGATGG TTTAACTATA
GTTGCAGAAG TAAACGGACA GGTTCTTTTA GTCAAAAATA AGATTACCGT ACAAGAAATC
TATGTAGTTG AAGGCGATGT TTCAATCAGA ACCGGAAATA TTACATTCTT GGGTTCGGTC
TTTGTAAACG GAAACGTAGA TGACGGCTTT GTTATAAAGG CTTCGGGAAA TATAGAAGTT
AAGGGCTCGG TCGGCAGGGC GGAGCTTGAT ACCGAAGGCG ACATAGTTGT AAGTCAGGGT
ATCATGGGCA AAGAAGGCGG CGTAATAAGA GCAGGCAAAT CTATCTGGTC TAAATTTATT
CAAAACACCG ATGTTGTTGA AGCCGGAGAC ATGGTTATTG TTTCGGACGG TATTATAAAA
TCGAATGTAA TGGCTAACCG TAAAATTATA TGCCGCGGAA AGAAGGCAGA TATAATAAGC
GGCAATTTAA GCGCCTCCGA ATCTATCTCG GCAAGGAATT TAGGAAGTGT TTCAGGCGGA
AACGATCTTA TGTTAAGTGT AGGATTTGAC CCGAAAAGCA AGGAGCGCTT AAACTTCTTG
CTCCAAAAAC AGGAAATGGA TCAAAAAAGC TTGGAAGATT TAAAGCTTAA TCTAATGAGC
CTTGAAGAGC TTAAATCCAA GCGGGGAGAG CTTCCAAAAG ATAAAGAAGA AAACTATAAC
AAGATGAACG AGTATAAATA TACTCTTCAA ACCGATATTC ACGAAGTACA AAAAGAAATT
ACCCAAATAA AAGAGTATTT AAATACGTTG AAAAATCAAG GCAGGGTTTC CGCTTCCGGA
CATGTATATC CGGGAGTACG CATAGTTATA CGGGATACCA CCGAGGATGT AAGAATGGAT
TGTAAGGCTA CTACATTCTA TCTTGACAAG GGAATTGTGC GTTACGGAAA GTATCAAGAA
GAGAACGAAG AGGATTTTAA GAAGGTTCCA AGTGGCTATT CAACCAATTG A
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| Protein sequence | MVRLNQIQEK MSEMHELDSG RFFVDISGET LDEALANAAI QLGMPVSSID YEILQKGASG
FFAIVPKEWK IRAYETVKVK KPQNIEDEKV ETEDIIEDGT VINKDGMGYV FCAADGIYFK
VTAPSGTGHA FDIKAARNKF RDRALPIPED DILNPILEEK TGEYVRVAPY KRIPGNDAAM
VVNISDDEMK AYLYVTPPTT GGVDLSADTI IAFLKNNRII VGINEERVKQ FQDSPVYRED
YLVAEGIAPQ NGADAKIIYN FEVDNTRVRL QETRSGQINF KELNLIQNVV EGQPVAQKVP
AQRGKAGKTV TGKYLEALNG KDVAMPVGKN TKIAADGLTI VAEVNGQVLL VKNKITVQEI
YVVEGDVSIR TGNITFLGSV FVNGNVDDGF VIKASGNIEV KGSVGRAELD TEGDIVVSQG
IMGKEGGVIR AGKSIWSKFI QNTDVVEAGD MVIVSDGIIK SNVMANRKII CRGKKADIIS
GNLSASESIS ARNLGSVSGG NDLMLSVGFD PKSKERLNFL LQKQEMDQKS LEDLKLNLMS
LEELKSKRGE LPKDKEENYN KMNEYKYTLQ TDIHEVQKEI TQIKEYLNTL KNQGRVSASG
HVYPGVRIVI RDTTEDVRMD CKATTFYLDK GIVRYGKYQE ENEEDFKKVP SGYSTN
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