Gene TDE2627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2627 
Symbol 
ID2740801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2668622 
End bp2669230 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID637161523 
ProductTetR family transcriptional regulator 
Protein accessionNP_973225 
Protein GI42528127 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000108473 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGGG ACAAAACCGC CAATCATATA AAAATTATAG CCGCAGCAAA AGCCGAATTT 
ATGGAGAAGG GCTTTGATAA GTCCTCCATG CGAAGTATCA GCAAACGCTG CGGTATGACG
GCTGCGGGAA TATATCGGCA TTGTGTAGAT AAAGAAGATC TCTTTGATCA AATTGTCGCT
CCTGCAGTGG ACCGCATAAA TGCTTGGCTG GATGCACATG TTGCACGTTA CGCAGAGGCA
GTACAGAAGG AAAAGCATAT ACAGTGGCGG GATTCTGAAA TCGATATGAT GCGCGAGATA
ATCTATCCGA ATATGGAGGA ATATCATCTA TTACTGGCAA AATCGCGGGG GAGTAAGTAC
GAGCATTTCC TTCACGATCT TACAGAGGGG CAGCAAACGC AGCTTTTAAA ATATCTGCCG
ATGTTGAAAG CTCAAGGATA CGCCGTGAAA GACATCGATT CAAAGGAGCT GCATCTTCTG
CTTTCGGCAT ATACGACCGC TCTTTTTGAG CCGGTTATAC ATAATTACAG TTTGGAAGAA
GCATTACATT GTCTGAAAGC GGTGGAGGCA TTCTTTGTTC CGGGTTGGAA GCAGTTGTTC
GGGTTTTAA
 
Protein sequence
MPRDKTANHI KIIAAAKAEF MEKGFDKSSM RSISKRCGMT AAGIYRHCVD KEDLFDQIVA 
PAVDRINAWL DAHVARYAEA VQKEKHIQWR DSEIDMMREI IYPNMEEYHL LLAKSRGSKY
EHFLHDLTEG QQTQLLKYLP MLKAQGYAVK DIDSKELHLL LSAYTTALFE PVIHNYSLEE
ALHCLKAVEA FFVPGWKQLF GF