Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2627 |
Symbol | |
ID | 2740801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2668622 |
End bp | 2669230 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637161523 |
Product | TetR family transcriptional regulator |
Protein accession | NP_973225 |
Protein GI | 42528127 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000108473 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGGG ACAAAACCGC CAATCATATA AAAATTATAG CCGCAGCAAA AGCCGAATTT ATGGAGAAGG GCTTTGATAA GTCCTCCATG CGAAGTATCA GCAAACGCTG CGGTATGACG GCTGCGGGAA TATATCGGCA TTGTGTAGAT AAAGAAGATC TCTTTGATCA AATTGTCGCT CCTGCAGTGG ACCGCATAAA TGCTTGGCTG GATGCACATG TTGCACGTTA CGCAGAGGCA GTACAGAAGG AAAAGCATAT ACAGTGGCGG GATTCTGAAA TCGATATGAT GCGCGAGATA ATCTATCCGA ATATGGAGGA ATATCATCTA TTACTGGCAA AATCGCGGGG GAGTAAGTAC GAGCATTTCC TTCACGATCT TACAGAGGGG CAGCAAACGC AGCTTTTAAA ATATCTGCCG ATGTTGAAAG CTCAAGGATA CGCCGTGAAA GACATCGATT CAAAGGAGCT GCATCTTCTG CTTTCGGCAT ATACGACCGC TCTTTTTGAG CCGGTTATAC ATAATTACAG TTTGGAAGAA GCATTACATT GTCTGAAAGC GGTGGAGGCA TTCTTTGTTC CGGGTTGGAA GCAGTTGTTC GGGTTTTAA
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Protein sequence | MPRDKTANHI KIIAAAKAEF MEKGFDKSSM RSISKRCGMT AAGIYRHCVD KEDLFDQIVA PAVDRINAWL DAHVARYAEA VQKEKHIQWR DSEIDMMREI IYPNMEEYHL LLAKSRGSKY EHFLHDLTEG QQTQLLKYLP MLKAQGYAVK DIDSKELHLL LSAYTTALFE PVIHNYSLEE ALHCLKAVEA FFVPGWKQLF GF
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