Gene TDE2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2550 
Symbol 
ID2739915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2575610 
End bp2576305 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content38% 
IMG OID637161443 
Producthypothetical protein 
Protein accessionNP_973148 
Protein GI42528050 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.52441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTA AAATAGAAGG GGTCGAAATC GAATGGGCCG AATCAAAGGG GCGGAAACTC 
AGGCTTACCA TATCGCCTAA GACGGCTATT CCCTGTATCC ATGTTCCGAA AAATTATTCT 
CAAAGCAAGG CCTTGGACTT TGTAAAAGAA AATATTGCGT GGATAAAAAA ACATCAGGCA 
CGAATAGAAG AAAAGATTTT TAAGAAGAAT ATAAAAGCCT CATTAAAGGA CGGCTCCACG 
GTAAGTTTAT GGGGAGCCGA TTATAAAATT AAAATACTGC GTGCCAAAAA AAATGCAAGC 
GTCGCAGTCG ATGATGATTT TATCTATTTA AAAGAGCCTT TTGGAGCGGA TCCAAAAAAA 
CGGCCTTCAA TTTTGAACCG TCTTTATAAA AAGGAATTGG AACTTTATGT AGAAGAAATC 
TTGCCCTTTT GGGAAGATAA AATAAAAGAA TCCGCCTCCG AGATAAAATA CAGGGATATG 
AAAAGCAAGT GGGGTTCATG TAATTCTTAT ACCGGCATAA TTACCTTAAA CACAAAGCTT 
GCAGCTCTTC CTTGTGAATG TGCCGAAATG GTGCTGGTAC ATGAGTTCGT TCATTTTAAG 
GAAAGGCTCC ACAACGACCG CTTTAAGCGA TATATGACTA AATATCTTCC CGACTGGAAA 
GAAAGAGTTA AGCTCTTGAA TTCTGAAGAT TATTAG
 
Protein sequence
MIIKIEGVEI EWAESKGRKL RLTISPKTAI PCIHVPKNYS QSKALDFVKE NIAWIKKHQA 
RIEEKIFKKN IKASLKDGST VSLWGADYKI KILRAKKNAS VAVDDDFIYL KEPFGADPKK 
RPSILNRLYK KELELYVEEI LPFWEDKIKE SASEIKYRDM KSKWGSCNSY TGIITLNTKL 
AALPCECAEM VLVHEFVHFK ERLHNDRFKR YMTKYLPDWK ERVKLLNSED Y