Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2536 |
Symbol | |
ID | 2739048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2562460 |
End bp | 2563401 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637161429 |
Product | hypothetical protein |
Protein accession | NP_973134 |
Protein GI | 42528036 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.13473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAAA AGTATGCTAT TTTAATTGAC GGAGACAACA TAGCTCCTTC CTATCTCGAC TCGATAATTT CCGAAGTTTC AAAAGAAGGA GAGGTTCTGA TAAAAAGACT TTACGGGGAC TGGACTACTC CCAATATGAA CGGCTGGAAA CCTTGGCTTG AAAAAGTACC TATCCGGCCC GTCCAGCAAT TTAGAAACGG TCCCAATGCA ACCGATAACA CAATCATAAT GGATGCTATA GAACTTGCAA ACACAAATCA AGGAATAAAT GCTGTCTGCA TAGTTTCTAC CGATTCCGAT TATTACAGCC TTGCCCTAAA ATTGCGGGAG TATGGGCTCT ATGTTTTGGG AATCGGAAAA TCCAATGCAA AACCTCTTTG GGTAAACGCC TGCAACGAAT TTAAATATCT TGAAAACTTT GATGAAACTG AAGAATACGA AGAAGACGCA AAAAGCGGCA AAAAGTTTAA ATCCCTCGAA GACCTTATCT GCCATGCTTA TAGAAATTCC CGCATGACAG AAGAAGGCTG GGTAAGTCTT TCCGACCTAG GAAATTCCAT ACGTAACTTT ATGCCGGAAT TCGATCCACG CTCTTACAGC CACAACACAT TGAGAGAAAT AATCGATGCC CTATCGGATG ATTTTGAACT AAGGTCGGAC GACAGGATAC CGCCCAACTA TTGGATAAAG GCAATAGGCC GCAAAAATGA AACGCCAAAA ATAAAGGGAA AAATAAAACG GCTTATGAAC CGATACGGAA TTATCGAAAA CGAAAACGGA GACTTTTTCT TTTCGTTCAC AAACATCGAT AAAAAATGCA GGGACAAACT TATAAAAGAG GGAACACCGG TAAAGTTCAG GGTGTTTAAG ATGCCAAATC CCAAGGGCGA AGACTCGGCT GACAGAAACG GAAAAGCAGC CGAAATTGAA ATAATAGGTT AA
|
Protein sequence | MEKKYAILID GDNIAPSYLD SIISEVSKEG EVLIKRLYGD WTTPNMNGWK PWLEKVPIRP VQQFRNGPNA TDNTIIMDAI ELANTNQGIN AVCIVSTDSD YYSLALKLRE YGLYVLGIGK SNAKPLWVNA CNEFKYLENF DETEEYEEDA KSGKKFKSLE DLICHAYRNS RMTEEGWVSL SDLGNSIRNF MPEFDPRSYS HNTLREIIDA LSDDFELRSD DRIPPNYWIK AIGRKNETPK IKGKIKRLMN RYGIIENENG DFFFSFTNID KKCRDKLIKE GTPVKFRVFK MPNPKGEDSA DRNGKAAEIE IIG
|
| |