Gene TDE2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2503 
Symbol 
ID2741476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2527967 
End bp2529139 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content39% 
IMG OID637161395 
Producthypothetical protein 
Protein accessionNP_973101 
Protein GI42528003 
COG category[S] Function unknown 
COG ID[COG2861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.181998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAA AGAGCACCAA AACAGGAAAA ACAACTAAAC CGGTAAAAAA AACCGGAAAA 
AAAAGAAGAA AAAAGTCAAA AATTAACTAT ACCGGAGCTA TAGCCGGTTT TTTGGCAGTC
TGTATAATAA TGCTCGCAGT ATTTTTGTTT ATAATTCCTT CGGTAAAAAA TAAAGATGAA
ACAACGAATA AAACGCAAAT TGCCAAGGAA CAAGAAAAAA TAGAAGAAGA AAAGCCTAAA
ACTACCGAAA AGCCGCCTAT AGAAAGCAAG GCTAAAGATA AGCGTACCGA AAAAACTAAG
GAAGCTGAAA CGCAGGCCTC AAAAAATCTG CCTAAAGAAG CTGCAAAAAA GACTTTACAT
GATAAGCCTA AAGAAAGCGA AAAGGCGGGC AGAGAAAACA AGGCAAAAAA GCCTGAAAAT
CCCATAATCA CGGGTAAGCC TAAACCTCAA GAACAAGAGC CTGACGTTTC GGCCTACCCT
ATTCAGGACC TGCCTGAGCT TCCCTCAAAG GGAAAACTTA TTTTTGTGTT TGACGATGCA
GGACACAACC TTGAACAGTT ACAGTATTTT TTGGATTTAC CCTTTCCCTG TACCATAGCC
GTTTTGCCTA AGCTGCCTAA CTCAAGAGAA ACGGCAAGAA GAATAAGGGC TGCCGGAAAG
GAACTCATCC TTCATCAGCC TATGCAGGCA TTAAACCCCA ATATTAATCC GGGAGATGGA
GCCGTTAAAC CCGGCATGGA CCGTGAAGAG ATAAAAAAAA TCGTAGCTTC AAATGTGGAA
GAAATTGGGC CCATAGCCGG AATGAATAAC CACGAGGGCT CTCTTATTAC ATCGGATGAA
AAAGCTATGG AGGCAGTGCT TGAATTGTGC AGGGAAAAAA ACATATACTT TTTGGATTCC
CGCACCAGCT CAAAAAGCGT TGTTCCTCAA GTTGCAAAAA AACTGAATAT GAATATTTGG
GAAAGAGCTG TCTTTCTTGA TAATAAAAAA GATAAGGCCT ATATGAAAAA ACAAATTATA
GAAGGCTTGG AAATTGCCTC ACAAAGAGGT GAAGCGATTA TGATAGGCCA TGTGTTTACC
GTAGATCTTG CAATCCTTTT AAAAGAAATG TACTCCGATT TAACACAAGA AGGATATACA
TTTTCTACAA TTTCAAAATC AAAAGGGAAA TAA
 
Protein sequence
MAKKSTKTGK TTKPVKKTGK KRRKKSKINY TGAIAGFLAV CIIMLAVFLF IIPSVKNKDE 
TTNKTQIAKE QEKIEEEKPK TTEKPPIESK AKDKRTEKTK EAETQASKNL PKEAAKKTLH
DKPKESEKAG RENKAKKPEN PIITGKPKPQ EQEPDVSAYP IQDLPELPSK GKLIFVFDDA
GHNLEQLQYF LDLPFPCTIA VLPKLPNSRE TARRIRAAGK ELILHQPMQA LNPNINPGDG
AVKPGMDREE IKKIVASNVE EIGPIAGMNN HEGSLITSDE KAMEAVLELC REKNIYFLDS
RTSSKSVVPQ VAKKLNMNIW ERAVFLDNKK DKAYMKKQII EGLEIASQRG EAIMIGHVFT
VDLAILLKEM YSDLTQEGYT FSTISKSKGK