Gene TDE2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2500 
Symbol 
ID2741473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2524042 
End bp2524596 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content47% 
IMG OID637161392 
ProductDJ-1 family protein 
Protein accessionNP_973098 
Protein GI42528000 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0133891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CTTTTTTATT TTTAGCAAAC GGATTTGAAG ATGTTGAAGC CCTTACGCCC 
ATAGATTATT TGAGAAGGGC CGGAATAGAT TTAATTACTG TCGGCGTCGG TGGGAAGACT
ATAGTTTCTT CTCACAAGGT TCCTATAACC TGTGATATTG TGTTGGAAGA AGCCTTGCAA
AAGGATGGCG ATTTAATTGC CGTCATCCTT CCCGGCGGCC TTCCTAACAG CAGCACTCTT
GCCGGCTCAG AGGCTGTCAG AGAATTTGCA AAAAAGACCC TTGCAGGCGG GGGAATCGTC
GCTGCAATCT GCGCGGCTCC GGCTCTTGCC CTGGGTTCTT GGGGTCTTTT AGAAGGAAAA
AACTATACCT GCTACCCCGG TATGGGACAG GATTTGAGTA CAAAACCCAA GGCCGGAGAG
CGTGTCATCA GGGACGGAAA TATAATAACG GCCTGCGCAG CAGGAGCTGC GGAAGAATTT
GCCTTTGCAA TTGTAGAAGC TATTTGCGGA AAAACCGCAC TAAATAAACT TAAAACTGAG
GTGGTGGCAC GATAA
 
Protein sequence
MKKAFLFLAN GFEDVEALTP IDYLRRAGID LITVGVGGKT IVSSHKVPIT CDIVLEEALQ 
KDGDLIAVIL PGGLPNSSTL AGSEAVREFA KKTLAGGGIV AAICAAPALA LGSWGLLEGK
NYTCYPGMGQ DLSTKPKAGE RVIRDGNIIT ACAAGAAEEF AFAIVEAICG KTALNKLKTE
VVAR