| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2475 |
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| Symbol | |
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| ID | 2741448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2497220 |
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| End bp | 2498611 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637161367 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_973073 |
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| Protein GI | 42527975 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.211957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTACAA ATTTAAAACA TAAATATTTT GGGCCTTTTT CTTTTTATAA AAATGCCGTA
AAATTAGCTG TACCTGTAAT GGTACAGCTT TTTATTCAAT CTCTTGTTTC TCTTATAGAC
AACTTTATGG TTGCCGACCT AGGCGACCTA AAAATGAGCG GGGTAAATGT TGCCAACCAA
ATTATCTTTG TATACATAAC CGGCCTCAAT ATTCTTTGCA GTGCGGGCGG AATGTTTATG
TCGCAGTATA ACGGCACAAA AGATGAAGAA GGGATGCAGC AGGCCTACCG CTTTAAGCAG
ATATCCGGCA TAATCTTCGC CCTTGCTCTT CTTGGTATCT GTCTTACAAT CCCCGACCTT
GTTTTAGGCC TCTTGGTGAA TGGTAATACT GCAAAAAAAG AAATAGTAGA GCAGGCCGTA
ATTTACAGTA ATGTTATTCT ATTATCGTTT ATTCCCACAG CCTTTTCGAT AGGAATAGCT
TCCTCTTTCC GTGAAACGGG AAATGTAAAG GTTCCCATGT ATATATCCCT TGTTTCAACC
CTTATAAATA CTATCGGAAA CTACATGCTC ATATACGGAA ATCTGGGAGC CCCAAGGCTT
GAGGTAGCAG GAGCTGCCTA TGCTACGGTA ATTGCCCGCT GTGCCGAGCT TATAATTTTT
GTTCTTTATG CAAAAAAAGT TAAGCCTCTT TTCTATGTAA AAATAAAAGA AATGCTTAAA
ATAAAGCTTC ACCTTTTTTA TGAGATTTTA AAAAAGTCTG CCCTCATCTT TGTTGCCGAT
ATGTCTTGGG TTCTGAGCGA GATAGTGGCA ACGGCTGTTT ATAACAGCAG GGGAGGCACT
GAAGTTGTAG CCGGTATGTC TGCGGGCTGG ACAATTGCCA ACCTATTCTT TTTGGTTTTT
CCGGCAATAG GTACTTCGGT TGGCGTTATA ATAGGCGGTA CCCTCGGAAG AAATAAGCTT
GAGGAGGCAA GAGAGCAGGC CCGTTGGATT AAAAGAGGTG CTTTTGTACT CGGTCTCGGA
ACATCCCTTT TAGAGCTTTT TTCGATTATG CTGGTTCCGA TTGTGTTCCG TAGTTTAAGT
CCTGCTTCTC ATGAGGTTAC AAGGCTTCTT ATAATCTTTA TCGCTCTTTA TATGCCTGTA
TGGACCTTTC AAAACACCCA ATATGCGATA GCCCGATCCG GAGGGGATGC GGTCATGGGA
GTCTGGGTAG ATACTACGGT AAATATGTTC TTATTTATGC CCTGCATGCT TTTGTTATAT
TATTTTACGG ATTGGTCTTC ACCCATTATG TATGCAATTG CTAAACTTAC CAGCATAATG
AAAGCTGTCC TTGCCGAAGT CCAGCTAAAA AAAGAACGCT GGGTCAAAAA CTTGACTAGG
ATTGAAAAAT AA
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| Protein sequence | MVTNLKHKYF GPFSFYKNAV KLAVPVMVQL FIQSLVSLID NFMVADLGDL KMSGVNVANQ
IIFVYITGLN ILCSAGGMFM SQYNGTKDEE GMQQAYRFKQ ISGIIFALAL LGICLTIPDL
VLGLLVNGNT AKKEIVEQAV IYSNVILLSF IPTAFSIGIA SSFRETGNVK VPMYISLVST
LINTIGNYML IYGNLGAPRL EVAGAAYATV IARCAELIIF VLYAKKVKPL FYVKIKEMLK
IKLHLFYEIL KKSALIFVAD MSWVLSEIVA TAVYNSRGGT EVVAGMSAGW TIANLFFLVF
PAIGTSVGVI IGGTLGRNKL EEAREQARWI KRGAFVLGLG TSLLELFSIM LVPIVFRSLS
PASHEVTRLL IIFIALYMPV WTFQNTQYAI ARSGGDAVMG VWVDTTVNMF LFMPCMLLLY
YFTDWSSPIM YAIAKLTSIM KAVLAEVQLK KERWVKNLTR IEK
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