Gene TDE2461 details

Gene Information

• Locus tag: TDE2461
• Symbol: selD
• ID: 2739646
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2487286
• End bp: 2488350
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637161353
• Product: selenide, water dikinase (selenocysteine-containing)
• Protein accession: NP_973059
• Protein GI: 42527961
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0709] Selenophosphate synthase
• TIGRFAM ID: [TIGR00476] selenium donor protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000145839
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTGTT CACTTATTAA TGAAGATTTC GATTTATTAA AAGCTGCAAA AAATCCGGGC 
TGAGGTGCAA AGCTGAGTGC GGGTGCACTC GATAAACTTT TAAAAAATTT TTCCGTAAGG 
AATGACGATA ATTTACTCGT AGGTTTTAAT ACTTCAGATG ATGCTGCCGT CTATAAGATA 
AACGATAAAA CGGCTCTTAT ATCTACTATA GATTTTTTTC CGCCGGTTTC AGGCGATCCC 
TACATATTCG GGCAAGTTGC CGCCGCAAAT TCTTTAAGCG ATATTTATGC GATGGGCGGG 
GAGCCTAAGC TCGCCCTAAA TCTTTTTTGT ATTACCAAGG ATATGCCTGA AGATATGATA 
AAAGAAATTT TACGCGGCGG TTTCGATAAG GTTTATGAGG CCGGTGCCAT TGTCTGCGGA 
GGACATACCA TTTATGATGA CTCGCCCAAG TACGGTTTGG CTGTAAACGG CTTTGTTCAT 
CCTAAAAAGA TTTTAGAAAA TTCGACAGCA AAGGAAGGCG ATGTTTTAAT TTTGACTAAG 
CCTATCGGCA CGGGTATTTT ACTTACGGCT TCAAAGGCCG ACATGTCGCC GCCGGAAGAA 
CTTGACCGCT GTTATAAGAT TATGGCTTTT TTAAATGCGA AGGCCCGCAA TATCATGGTA 
AAATACAAGA TAAATGCCTG TACCGACATT ACAGGTTTCG GTCTTCTCGG TCATCTTTAT 
GAGATGGGGA AGGGAAGCGG TATGAGCATT GAAGTCGATT ATAAATCCGT TCCTATTTAT 
AAATCCGTAA TTGAAAGTGC CGAAATGGGT ATGATGCCGG CAGGAGTTTA CTCCAATAGA 
AATTTTGTCG GAGATAATAT TGTCTTTGAA AATGTTCCCC TTGCATATCA AGACCTGATG 
TTCGATCCTC AAACTTCGGG AGGGCTTTTG ATTTCGGTAG ACAAGGAAGA TGCTGCTGCT 
CTTTACGAGG AACTGTCTCA AGCTTTGGAA AATACTCCCT GCGGCAAACC TGCCATTATA 
GGCCTTGTTA CCAAGAGGGA CGAAAAAATT CTTAGGGTGA GTTAA 

 

Protein sequence

MSCSLINEDF DLLKAAKNPG UGAKLSAGAL DKLLKNFSVR NDDNLLVGFN TSDDAAVYKI 
NDKTALISTI DFFPPVSGDP YIFGQVAAAN SLSDIYAMGG EPKLALNLFC ITKDMPEDMI 
KEILRGGFDK VYEAGAIVCG GHTIYDDSPK YGLAVNGFVH PKKILENSTA KEGDVLILTK 
PIGTGILLTA SKADMSPPEE LDRCYKIMAF LNAKARNIMV KYKINACTDI TGFGLLGHLY 
EMGKGSGMSI EVDYKSVPIY KSVIESAEMG MMPAGVYSNR NFVGDNIVFE NVPLAYQDLM 
FDPQTSGGLL ISVDKEDAAA LYEELSQALE NTPCGKPAII GLVTKRDEKI LRVS