| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2328 |
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| Symbol | mtrF |
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| ID | 2739423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2364874 |
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| End bp | 2366424 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637161220 |
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| Product | efflux pump component MtrF |
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| Protein accession | NP_972928 |
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| Protein GI | 42527830 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
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| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.25696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA AAAAGAACAA GGAAGTTTCA GGCTTCCTAA AAGGAGTTGA AAGGATCGGA
AATAAACTGC CGCATCCTGC TATTATTTTC TTAATTTTAA GTATCATTGT AATCATCGTT
TCTGCACTCG CAGAAGCCTA CGGTACCCCC GTTACCTACT TTGATGCAAA AAAGGGAAAA
GAAGTTACTA TCGGAGCTGT ATCGCTTTTA AACCTTGACG GTCTTAGGTA CATTCTAAAC
ACCGCTACAA AGAATTTTAC AGGCTTTGCA CCCTTGGGAA CGGTTTTGGT TGCTATGCTC
GGTGTAGGTG TTGCAGAGTG GACAGGACTT ATCAATACCT CTCTTAAAAA ACTTCTTTCG
GGTGTTCACC CCAGACTTTT AACTGTTGTT GTTGTTTTCG CAGGTATTAT GAGCAATATC
GCTTCAGACG CAGGATACGT TGTAGTTATT CCCCTTGGAG CCATCGTATT TGCTAATGCA
GGCCGCCATC CGATGGCAGG TCTCGCAGCC GCTTTCGCAG GTGTTTCGGG AGGTTTCTCT
GCCAACCTCG TGCTCGGTAC AATCGATCCG CTTTTGACAG GCATCACTGT TGAAGCCTTA
CATAATGCAG GAATGGATAT AGCTATCGAC CCGACATGTA ACTGGTTCTT TATGATTGCT
TCCACCTTCC TTCTTACGGT TGTAGGTACA TTTGTTACGG AAAAAATTGT TGAAAAAAAC
TTAGGCACAT ATAACGGCTC ATACAAGCCG GATAATATGC CTGTTTCCGA TGTTGAAAAC
AAGGGATTGA AACTTGCAGG TATTTCGGTT TTGATTATGG CCGTTATTTT AATTATCGGC
CTTTTCGGTC TTCCCAAGCT CCCCGGTCTT GCAGTTTTAA GAGAAATCGA TCCTAAAACA
GGGGAATGCT CAATTTCAAA CTTTATGCAC GGAGGTCTTT TGCCGGTAAT TCTTTTAATC
TTCTTGATCC CCGGTCTTAT CTACGGAAAG AAAACAGGAA AGATTAATTC TTCACATGAC
CTCGTTAAGG GTATGTCGCA TGCCATGAGC TCGATGGGCG GTTATCTCGT ATTGAGCTTT
TTCGCTGCAC AGTTTGTAAA CTACTTCGGA AAAACAAACC TCGGAACAAT CATTTCGGTA
AACGGTGCAA ACTTTTTAAA GAGCATCGGC TTTACAGGCT TGCCGCTTAT AATCTCCTTC
GTTATTATTT CGGCCTTCCT TAACCTCTTC ATGGGCTCGG CTTCTGCAAA GTGGGCTATT
ATGGCTCCTA TCTTTGTTCC CATGATGGTA AACCTCGGCC TTTCACCTGC CTTAACACAG
GTTGCATACC GAATCGGAGA TTCAAGTACA AACCTCATCA CTCCCTTGAT GAGCTATTTT
GCAATGATTG TTGTATTTAT GAAAAAATAC GATGAAGATT CCGGTCTTGG AACATTGATT
TCAACCATGC TGCCCTATTC AATAGCATTC TTGCTTTCAT GGATAGGCCT CATGATTATT
TGGTACATCT TCGGTCTGCC CCTCGGCCCC GGAGCATTTA TCCACATCTA A
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| Protein sequence | MDKKKNKEVS GFLKGVERIG NKLPHPAIIF LILSIIVIIV SALAEAYGTP VTYFDAKKGK
EVTIGAVSLL NLDGLRYILN TATKNFTGFA PLGTVLVAML GVGVAEWTGL INTSLKKLLS
GVHPRLLTVV VVFAGIMSNI ASDAGYVVVI PLGAIVFANA GRHPMAGLAA AFAGVSGGFS
ANLVLGTIDP LLTGITVEAL HNAGMDIAID PTCNWFFMIA STFLLTVVGT FVTEKIVEKN
LGTYNGSYKP DNMPVSDVEN KGLKLAGISV LIMAVILIIG LFGLPKLPGL AVLREIDPKT
GECSISNFMH GGLLPVILLI FLIPGLIYGK KTGKINSSHD LVKGMSHAMS SMGGYLVLSF
FAAQFVNYFG KTNLGTIISV NGANFLKSIG FTGLPLIISF VIISAFLNLF MGSASAKWAI
MAPIFVPMMV NLGLSPALTQ VAYRIGDSST NLITPLMSYF AMIVVFMKKY DEDSGLGTLI
STMLPYSIAF LLSWIGLMII WYIFGLPLGP GAFIHI
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