Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2281 |
Symbol | |
ID | 2740031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2317510 |
End bp | 2318583 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637161170 |
Product | LysM domain-containing protein |
Protein accession | NP_972881 |
Protein GI | 42527783 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0169093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCAA AAATAGGAAT AAAACTTGCA GACGGGACAT TTTTCCCGAT TTTGGATGAA AGTGCACTTT CCGAGCAATC TTTGGAATTG ACTACGGTTA GGGATGATCA GGAAAGTGTT CAAATAAATT TATTTAAACA AGTTGACGGG GCAGAGCCCG AATATATAGG CTCCCTTATT GTAGAAGATA TTTCAACGGG GCGTGCCGGT GATCCCACTA TAAATTTAAA AATAAAGCTT GATGAAGAAA AAAATCTTTC TGCAGAAGCC GTCGATGAGG GCTCCGGATC TCATCAATCG CTAAGAGTAT CTTTAAAAAA TCTTGATGAG GCAAGCCTTG AAGGTATGGA TTTTGATTTT GCTTCCCTTG ATTCCTCATC CGGGTTTACA AGTGGTGATG ACGATTATTT TATAAAAGAA AGTGATGATC TTTCGTTTGA TGAATCGCTT GAATCTCAGG CTGATTCTCA ACTTTACGAT AATGAAGAAA AACCTGAAAA AAAGAAAAAG ATGCCTTTGT GGCTTATAAT TATAATAATA ATTCTTTGTA TAACAGCCTT GGTATTTGCC ATTCTTCTTT TGACAAAAAA AATGCCCTTT GCCGATAAAG ATAAGATAGC TTCGGTTCCT GAAAAAGTTG AACAGGTGCA AGAGTCAAAA AAAGATGTAA ATGCGACAAC CTCTAATGTT CCTAAAGAAA ATACCGCAGA AAAAGCTGCC GCTGAAGCCA AGCGAAAAGC TGAAGAAGAG GCCAAACAAA AGGCTGAAGC TGAAGCCAAG AAAAAAGCCG AGGAAGAAGC CAAGCAAAAG GCTGAAGCCC AGGCTAAAAA GAAGGCTGAA GAAGAAGCTA AACAAAAAGC AGAGGCCAAG AAAAAGGCTG AAACTCAACA AAAATCGAAT ACAAATTCAA ATGGCGCAGT ACGGTACAAG ATCAAATGGG GAGATACTCT GTGGGATCTA TCCGAGACCT ATTATAAAAC GCCTTGGCTT TACAAAAAGA TAGCGGATTA CAACAAGATT AAAAATCCTA ATCTTATTAT AGCAGGAACT TATATAGATA TTCCGCCTAA ATAA
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Protein sequence | MASKIGIKLA DGTFFPILDE SALSEQSLEL TTVRDDQESV QINLFKQVDG AEPEYIGSLI VEDISTGRAG DPTINLKIKL DEEKNLSAEA VDEGSGSHQS LRVSLKNLDE ASLEGMDFDF ASLDSSSGFT SGDDDYFIKE SDDLSFDESL ESQADSQLYD NEEKPEKKKK MPLWLIIIII ILCITALVFA ILLLTKKMPF ADKDKIASVP EKVEQVQESK KDVNATTSNV PKENTAEKAA AEAKRKAEEE AKQKAEAEAK KKAEEEAKQK AEAQAKKKAE EEAKQKAEAK KKAETQQKSN TNSNGAVRYK IKWGDTLWDL SETYYKTPWL YKKIADYNKI KNPNLIIAGT YIDIPPK
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