Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2256 |
Symbol | |
ID | 2741361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2292296 |
End bp | 2293477 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637161145 |
Product | hypothetical protein |
Protein accession | NP_972856 |
Protein GI | 42527758 |
COG category | [S] Function unknown |
COG ID | [COG5438] Predicted multitransmembrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000922663 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTA TTTTCCTTTT TGTTGTAAGC CTCTTATTTT TTAATTTATA TGCAGACGAC ACAGGGCAAA CTTCCTCTGA AAACTTATCG CAAGATATGG AAAAGAAGTA CGATGGCTTA AGCAGTTATT ATAATGCCTA TATAAATGCT CCCGAAAGTC AGGTCGTTAA GGCTAGGGTT ATAGAAATCG TTTATGACGA TACAAAGGAA AACCGCCCCG ATATTCCTAT AGAGTCGGAC TTCCGTTATC AGCATTTAAA GATAAAAATT TTAACCGGAA AGCATAGAGA TGAGGTTTAT ACAATCCGGA ATACTATAGA GCTCGCCATT CCTTATAAAC TTATTTTTAA GGTAAACGAA AAGCTCATCT TACAGCTGGA TGAAGATGAA ACAGGGAAGG TAAACAACTT GCGCATTTAT GAGAGGGCGA GGGACTATAA GGTCTATGCT CTTATTTTTA TTTTTGCAGC GGTTTTAATT TTTGTCGGCA AAAAAAACGG TCTAAAAGCT CTTATCTCCC TGGGGCTTAC CATAGGCCTG ATATTCGGCA TTTTTCTTCC TCTTATACTT CAAGGTCATA ATCCTATTCT TTGGGCTATT ATAATTTGCA GCCTTGCTTC CGTTATTACT CTTTTTATTA TTTCGGGAAT GAATAATAAA ACCTATACGG CAATTTTGGG AACTATAGGC GGTGTTATTA TCGCAGGTCT TTTTGCCTTT GTTGCAGGAA AAATTTTAAG ACTTTCAGGT TTGGGAAACG AAGATGCTCA AATGTTAGCC TTTGTTCCGC AGTACCGTAA AATAGATTAT CAGGGACTTT TATTTGCCGG CATTATGATA GGCTCCCTCG GAGCCGTTAT GGATGTAGCT ATGTCTATTT CTTCTTCGAT GTGGGAGATT GTAGCTGTAA GTCCTAAGAT ACCGAATAAA CAGCTGATCA AATCGGGGAT GAATATAGGG CGGGATATTA TAGGCTCAAT GTCCAATACG CTTATTTTAG CCTATGTGAG TACGTCAATT CCCGTTCTTT TACTCTTTAT AATTTTTTCG CACGGGTTTA CCGAAATCAT AAATTTGGAA ATTTTATCGG CCGAGATATT GCGTGCCGTC TCCGGAAGTA TAGGTTTAAT CTGTACGATT CCCATAACCG TCAACTTAGT AAATATTTTT AGAAAGAACT AA
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Protein sequence | MKRIFLFVVS LLFFNLYADD TGQTSSENLS QDMEKKYDGL SSYYNAYINA PESQVVKARV IEIVYDDTKE NRPDIPIESD FRYQHLKIKI LTGKHRDEVY TIRNTIELAI PYKLIFKVNE KLILQLDEDE TGKVNNLRIY ERARDYKVYA LIFIFAAVLI FVGKKNGLKA LISLGLTIGL IFGIFLPLIL QGHNPILWAI IICSLASVIT LFIISGMNNK TYTAILGTIG GVIIAGLFAF VAGKILRLSG LGNEDAQMLA FVPQYRKIDY QGLLFAGIMI GSLGAVMDVA MSISSSMWEI VAVSPKIPNK QLIKSGMNIG RDIIGSMSNT LILAYVSTSI PVLLLFIIFS HGFTEIINLE ILSAEILRAV SGSIGLICTI PITVNLVNIF RKN
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