Gene TDE2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2234 
Symbol 
ID2741339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2272400 
End bp2273335 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content39% 
IMG OID637161123 
Productiron compound ABC transporter, periplasmic iron compound-binding protein, putative 
Protein accessionNP_972834 
Protein GI42527736 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.281475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCT TGAAAAAAAT TTTCTTTGTG CTGGCCATGC TTTTGGCTGC CGGCACCATG 
GTTTTTGCAG GAGGAGCAAA AGAAGCAAGC CTTCCCTCGA TTGATTTAAC GATGGATAGG 
GCTGGTGCCC CGATTACTTT ACCTGCAAAG GTGGAAAGAA TTATTTCGAT GGCTCCGTCT 
ACCACGGAAA TCCTTATTGA TTTAGGTGTA GCCGACAAGA TTATTGCTGC CGATACCAAT 
ACCCAAAAGG ATGGGCTTTT AAAACAGAAT ATTCCGTATT TTGATATGAT GAAGCCCGAT 
GCAGAAAAAC TGATTGCCCT AAAACCGGAT GTAGTTTTTA TCTCAGGGAT GTCGAATGCA 
AAAGGTAACA CTCCTTTTTC TCCCTTAATT GATGCCGGTA TCTGTGTTGT CAACATTCCT 
TCATCTTCAA GTATCGAGGC CATTTATCTT GATATTGCAT ACATAGCTGC AGTCGTAAAA 
CAGGAAGGAA ACGGAGCAAA AATTATTGCA AACATGAAAA AGGAAATAGA AGCTGTCCGA 
AAAAAGGGTG CTTCTATTGC TCAAGATAAA AAGAAAACCG TTTACTTTGA AATAGGGGCC 
GCTCCTTATA TGTACAGCTT GGGAACAGGA ACCTTTATCA ATGAGATGAT CGAAATTATC 
GGAGCTCAAA ATATTCTTGC CGATCAAAAA TCATGGGTAT CCGTTTCGGA TGAAATGGTT 
TTGGCTAAGG ATCCTGATGT AATTTTGACC AATGTAAACT ATATACCTAA TCCGATTGAT 
GAAATAATGT CCAGATCAGG CTGGGCTTCT CTTAAAGCCG TAAAGGGCAA AAAGGTTTTC 
GGTATTGATA CAAATTCTTC TTCAAGACCT AACCATAACA TTATAAAGGC CTTAAAAGAA 
ATGGCTAAAG CCGTCTATCC CGAAATCTAT AAATAA
 
Protein sequence
MKSLKKIFFV LAMLLAAGTM VFAGGAKEAS LPSIDLTMDR AGAPITLPAK VERIISMAPS 
TTEILIDLGV ADKIIAADTN TQKDGLLKQN IPYFDMMKPD AEKLIALKPD VVFISGMSNA 
KGNTPFSPLI DAGICVVNIP SSSSIEAIYL DIAYIAAVVK QEGNGAKIIA NMKKEIEAVR 
KKGASIAQDK KKTVYFEIGA APYMYSLGTG TFINEMIEII GAQNILADQK SWVSVSDEMV 
LAKDPDVILT NVNYIPNPID EIMSRSGWAS LKAVKGKKVF GIDTNSSSRP NHNIIKALKE 
MAKAVYPEIY K