| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2198 |
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| Symbol | |
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| ID | 2740220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2232992 |
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| End bp | 2236597 |
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| Gene Length | 3606 bp |
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| Protein Length | 1201 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637161088 |
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| Product | pyruvate-ferredoxin oxidoreductase |
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| Protein accession | NP_972799 |
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| Protein GI | 42527701 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.112499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAA AAACTCAAAC AATGACCGGT AATAATGCGG CTTCTTATGT AGCCTATGCC
TTTACCGATG TAGCCGCCAT TTATCCGATT ACGCCCTCTT CAGATATGGC CGAGCTTGTT
GACTCATGGG CAGCCAACGG AAGAAAAAAT ATTTTCGGTC AAACCGTTCT TGTTTCGGAA
CTGGAGTCCG AGGCGGGAGC AGCAGGTTCA ATGCACGGAG CCCTTTCTGC CGGTGCCCTG
GCTTCAAGCT TTACGGCCAG TCAGGGACTT TTACTTATGA TACCCAATAT GTATAAGATG
TCCGGTGAGC TTTTACCGGG TGTTTTACAT GTGTCGGCGA GAGCTCTTTC GGCTCACGCC
CTTTCTATTT TCGGCGATCA TCAGGACGTT ATGGCTTGCC GCCAAACGGG TTTCGGTATG
CTCGCTTCCG GTTCGGTACA GGAAATTATA GACCTCGGCG GTATTGCCCA CCTTGCAGCG
ATAAAGGGCC GAATCCCCTT CCTTCACTTT TTTGACGGCT TTAGAACCAG CCATGAACTT
CAAAATGTCG AGCTCATCGA GTATGAAGAC TTTGCAAAGA TGCTTGATTG GAAGTCCTTA
AACGATTGGC GTACCACGGC AATGAATCCG GAGCATCCAT TTACCAAAGG AACAGCCCAA
AACCCCGATG TTTATTTTCA GGCGGCAGAA GCCTCCAATA AATTCTATAC CGATGTTGTA
GAAATAGTTG CCGATTATAT GAAGCAGATT TCGGCCTTGA CGGGAAGAAC TTACCGCCCC
TTTGACTATC ATGGAGCTCC CGATGCCGAA CGCGTAATTA TAGCCATGGG TTCTATAACC
GAGACGGCCG AAGAAACCGT TGACTATCTT GTTTCCAAGG GAGAAAAGGT GGGCCTTATA
AAGGTAAGAC TTTACCGTCC TTTCTCGCCC AAATACCTTT TTGATGTAAT GCCCAAGACG
GTTAAAAGGA TTGCCGTTCT TGACCGAACA AAAGAGAAGG GCTCTCTTTA CGAACCCCTC
CATTTGGACA TACTCGGCGC ATACATTGAT GTGCCCAATA AACCTCTGAT AGTGGGCGGA
AGATACGGGC TTGCTTCTAA GGATACGACT CCCTCAATGG TAAAATCAGT ATTCGACAAT
CTTAAAGCCG ATGCTCCTAA AAACAATTTT ACCGTAGGAA TCGAAGACGA TATAACCAAT
TTGAGCCTCC CCGTTTTGGA GGAAATTAAG ACCGAACCCG CAGGAACAAT CAGATGTAAA
TTCTGGGGCT TCGGCTCTGA CGGAACCGTC GGAGCAAATA AGAGTGCTAT CAAGATTATC
GGCGACAGCA CCGGTATGTA TGCCCAAGCC TATTTTGCTT ATGACAGTAA AAAATCGGGA
GGCGTAACCA TTTCTCACCT CCGCTTTGGA AAGCAGCCGA TAAAATCCAC ATATCTTATA
AGCGATGCCG ACTTTATTTC CTGTTCAAAG CAGTCCTATG TTCATCAATA CGATTTATTG
AAGGGCTTAA AAAAAGGCGG AACCTTCCTG CTTAACTGCC TCTGGTCTGA CGAAGAATTG
GAAGCCAACC TTCCGGGAGA AATGAAGCGT TTTATTGCAA AAAATGAGAT AAAATTTTAT
ACAATCAATG CTACAGGTAT TGCTCAGGAA ATCGGTCTCG GCGGAAGAAT CAATATGATT
ATGCAGTCTG CCTTTTTTAA ACTTGCAGAA ATTATTCCCA TTGAAGAAGC CGTTGACAGC
TTAAAAAAAT CCATAGTCAG GGATTACGGT AAAAAAGGTG AAGACATAGT AAATATGAAC
TATGCCGCAG TAGAAAAGGG TGTAAATTCT CTTCACAAGG TTGCCGTTCC TGCCGCTTGG
GCAAATGCGG AGGATTCACA GGTTTGCAAT TCTCATCTTC CGCCCTATGT ACGCAATGTA
CTTATCCCTA TTAACAGACA GGAAGGCGAT GCTCTAAAGG TGAGCACCTT TAAAGGTGTT
GAAGACGGCC GAATGCCTAA CTGTACCAGC CGATACGAAA AGCGTGGTGT TGCAGTTGAA
GTTCCGCATT GGATAAAGGA AAATTGTATT CAGTGTAACC AGTGTTCTTT TGTATGTCCT
CATGCTACAA TCCGCCCCTT CCTTCTTAAT GAAAAAGAAA GGGCTGCTAA ACCTGAAGGC
TTTGAAACTA TAAAGGCCAA CGGAAAAGGC CTTGAAGGGC TTGAGTACAG GATGCAGGTT
TCGGTTATGG ATTGTACAGG CTGTTCGAAC TGTGCAAATA TTTGTCCTGC AAAGAATAAG
GCCCTTGTTA TGAAGCCCTT GGCTGAAGAA GAAGCTCAAA GCAAAAACTG GGATTATGCA
GTTGATAATG TTTCTACAAA GCATGGTCTT ATGGATCAGT TCTCCGTTAA GGGAAGCCAG
TTTAAACAGC CTCTCTTGGA ATTCCACGGA GCTTGTGCAG GCTGCGGCGA AACTGCCTAT
GCAACCCTTG TTACCCGTCT TTTCGGAGAC CGCATGATGA TAGCAAACGC TTCCGGTTGT
TCTTCGATAT GGGGCGGCTC GTATCCCACT GCCGGCTTTA CCTATAACGA AAAAGGAAAG
GGTCCCACTT GGGCTAGCTC CCTTTTTGAG GACAATGCAA ACTACGGCTA CGGAATGGCC
CTCGGTACCC GTAAGTTGAG GGAACAGGCC GAAGACTATA TGAAGAAATT TATTGAGCTC
AATGTCGGAA CTGATTTTAC TCCTCTCTTT AAAGAATGGA TTGAAAACAA AAAAGATGTT
GAAGCCAATA CCCTAACATG CGATAAGATT AAGACTCTCT TTGATGCTCA TCAGCCGCCT
AGAAATACGG CTGTAAAGAA TACCGAGGCC GCCGATTATC TTCCGGTTCC AGAAAGCCAT
ACCTTCAAAT ATGATACGGG AAATATTGAA GCTGACAGGC TCTTGGAATA TATCTACAAG
CTGAAGGACT TTATCGTCAA AAAGAGTGTC TGGTCCTTCG GAGGAGACGG CTGGGCTTAC
GACATCGGTT ACGGCGGTCT TGACCACACC ATGGCCTCGG GCGAAGACTT TAATATCCTC
GTATTCGATA CGGAAGTTTA TTCCAATACA GGAGGTCAGT CCTCAAAGTC GACGCCGACG
GCAGCTGTCG CCAAATTTGC GGCAGGCGGA AAGCGAATCC GCAAAAAGGA TTTGGGTGCA
ATGCTTATGA CCTACGGCTA TGTCTATGTA GCTCAGGTTG CCATAGGTTC CAATATGAGC
CAATTTGTAA AGGCTGTAAA AGAAGCCGAA AGCTATGACG GACCTTCGAT TGTTATCTGT
TATGCTCCCT GTATCAACCA CGGACTCCGC TCAGGAATGA GTAGAAGTGT AGAGCAGGAG
AAAAAGGCTG TTGAAGCAGG CTATTGGCAC CTATACCGCT TTGATCCCCG TTTAAAAGCC
GAAGGCAAAA ATCCCTTCCA GCTTGACAGC AAGGAACCGG GCGCTTCATT CCAAGACTTT
ATCAACTCCG AAGTCCGCTA TACTTCGCTT AAAAAGACCT TCCCCGATGT TGCGGAAGTC
TTATTTAAGC GTGCCGAGGA AGATGCTAAG GAGAGGTATA ATAGGTATAA GCGTATGGCT
GAATAG
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| Protein sequence | MQKKTQTMTG NNAASYVAYA FTDVAAIYPI TPSSDMAELV DSWAANGRKN IFGQTVLVSE
LESEAGAAGS MHGALSAGAL ASSFTASQGL LLMIPNMYKM SGELLPGVLH VSARALSAHA
LSIFGDHQDV MACRQTGFGM LASGSVQEII DLGGIAHLAA IKGRIPFLHF FDGFRTSHEL
QNVELIEYED FAKMLDWKSL NDWRTTAMNP EHPFTKGTAQ NPDVYFQAAE ASNKFYTDVV
EIVADYMKQI SALTGRTYRP FDYHGAPDAE RVIIAMGSIT ETAEETVDYL VSKGEKVGLI
KVRLYRPFSP KYLFDVMPKT VKRIAVLDRT KEKGSLYEPL HLDILGAYID VPNKPLIVGG
RYGLASKDTT PSMVKSVFDN LKADAPKNNF TVGIEDDITN LSLPVLEEIK TEPAGTIRCK
FWGFGSDGTV GANKSAIKII GDSTGMYAQA YFAYDSKKSG GVTISHLRFG KQPIKSTYLI
SDADFISCSK QSYVHQYDLL KGLKKGGTFL LNCLWSDEEL EANLPGEMKR FIAKNEIKFY
TINATGIAQE IGLGGRINMI MQSAFFKLAE IIPIEEAVDS LKKSIVRDYG KKGEDIVNMN
YAAVEKGVNS LHKVAVPAAW ANAEDSQVCN SHLPPYVRNV LIPINRQEGD ALKVSTFKGV
EDGRMPNCTS RYEKRGVAVE VPHWIKENCI QCNQCSFVCP HATIRPFLLN EKERAAKPEG
FETIKANGKG LEGLEYRMQV SVMDCTGCSN CANICPAKNK ALVMKPLAEE EAQSKNWDYA
VDNVSTKHGL MDQFSVKGSQ FKQPLLEFHG ACAGCGETAY ATLVTRLFGD RMMIANASGC
SSIWGGSYPT AGFTYNEKGK GPTWASSLFE DNANYGYGMA LGTRKLREQA EDYMKKFIEL
NVGTDFTPLF KEWIENKKDV EANTLTCDKI KTLFDAHQPP RNTAVKNTEA ADYLPVPESH
TFKYDTGNIE ADRLLEYIYK LKDFIVKKSV WSFGGDGWAY DIGYGGLDHT MASGEDFNIL
VFDTEVYSNT GGQSSKSTPT AAVAKFAAGG KRIRKKDLGA MLMTYGYVYV AQVAIGSNMS
QFVKAVKEAE SYDGPSIVIC YAPCINHGLR SGMSRSVEQE KKAVEAGYWH LYRFDPRLKA
EGKNPFQLDS KEPGASFQDF INSEVRYTSL KKTFPDVAEV LFKRAEEDAK ERYNRYKRMA
E
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