Gene TDE2156 details

Gene Information

• Locus tag: TDE2156
• Symbol: infC
• ID: 2739142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2190282
• End bp: 2190809
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637161046
• Product: translation initiation factor IF-3
• Protein accession: NP_972757
• Protein GI: 42527659
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000187486
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCTGAAG TAAAAGGTTT GCGGATAAAT GATCAAATCC GCGTGAGAGA GGTTAGGTTA 
ATCGGGGTTA ATGGAGAACA AGCGGGTATT GTTCCCACTA TTGAGGCTGT AAAAATGGCC 
GCAGAAGCCG GACTTGACCT TGTTGAAGTT GCACCTACCG CGAAGCCTCC GGTTTGCAAA 
ATAATAGATT ACGGTAAATA TCGATTTCAA ATGGAGAAAA AGCTCCGTGA CTCCAAGAAA 
AATCAAAAGC AGCAGATGAT GAGAGAAATC AGAATGCAGC CTAAGATACA CGACCATGAT 
CTTGAGTTTA AATCCTCGCA TATTAAAAAA TTTCTTGACG GCGGCGATAA AGTAAAGGTA 
ACCGTGCGTT TTTGGGGACG CGAACTTGCT CATACTGAGC TCGGTTATGA AGTTTTAAAC 
AAGGTTTTGG AAAAACTGGG GGGTGAAGAA GCCTGTACCC TCGAGAAAAA ACCTGCTATG 
GAAGGACGGA CAATGTCTAT GACATTGAGT CCAAAACAAA AAAAATAA 

 

Protein sequence

MAEVKGLRIN DQIRVREVRL IGVNGEQAGI VPTIEAVKMA AEAGLDLVEV APTAKPPVCK 
IIDYGKYRFQ MEKKLRDSKK NQKQQMMREI RMQPKIHDHD LEFKSSHIKK FLDGGDKVKV 
TVRFWGRELA HTELGYEVLN KVLEKLGGEE ACTLEKKPAM EGRTMSMTLS PKQKK