| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2143 |
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| Symbol | |
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| ID | 2739129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2178247 |
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| End bp | 2180544 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637161033 |
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| Product | penicillin-binding protein |
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| Protein accession | NP_972744 |
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| Protein GI | 42527646 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTC CGAAAAAATT GCCGATAAAA AACATTTTAA AAGCCTCGAT GCCGGCCTTT
ATTTCTAGCC TGATATTTTT AGCTTTAATA CTTTTTTTTA CACCCGGCTT TAAAGTCGAT
TATTCTTTTA CTCTTTACAG CTCCAATGGA AAACTTTTAG GTGCATCTGC TGCGATTGAC
GGGCAATGGA GATTTCCTCA AACTTCAAAG CTGCCTGAAA AGTACAGGGA AGCCCTTCTA
AGCTATGAAG ATAAAAATTT TTACTTTCAT TTTGGGATAG ATCCTCTTTC GGTTTTTAGG
GCCGCAGTTG AAAATATTTT AAAAGGAAAA ATAGTTTCCG GAGCCTCTAC AATTACGATG
CAGACCTCCC GCCTTTCCGA AAAAAATCCG GTAAGAAATT TTAAGCAAAA ACTAAGAGAA
AGTTTTTTAT CTCTTTTTTT TGAGCTTTCT TATTCCAAGG AAAACATATT GAATATTTAC
GCCTCCCATG CACCCTACGG CGGAAATGTT GTAGGCCTCG AAGCCGCCTC ATGGCGGTAT
TTCGGAAGGG GGCCTGAAGA TTTAACATGG GCGGAAGCTG CCTGCCTTGC AGTCCTTCCC
AATCAGCCCT CTTTGGTTCG CCCGGGAAAA GAATCCGAAA TCTTAAAAGA AAAAAGGGAC
AGGCTCTTGT ACAATCTTTT TTTACAAAAA AAAATCGATA AGGAAACCTA TGCTCTTTCC
GTTACAGAAC CCGTTCCCGA TAAACCTAAG GCCATTCCGC AAAAGGCCTA TCATTATCTT
GAGTTTTTAA AAACAAAAAG CTCCAATCAA AAAAACATAA GCAGCTTGGA TTATTCTTTA
CAGGAAATAA TTTTTGAAAT TGCAGACCAT CATTTTAAAA GGAATTTCTC AAGCGGTGTT
TACAATACAG CCGTTTTAAT TTTAGATACC GAAACGGGAA AGCCCCTTGC CTATATAGGA
AATACGGGGC TTCAAAGTCC GAATGCAAAA AACGAGCATG TCGATATGGT TCACGCAAGG
CGGAGTTCGG GGAGCTTATT AAAACCATTT TTGTTTGCAG CAATGCTGGA TGCGGGAATG
ATTTTACCGG ATCAACTCCT CATAGATATT CCGACAAAGA TAGCAGGCTA CACACCTCAA
AACAGTAACT ACACATATTC GGGAGCGATT CCTGCACGCA AGGCCCTTTC CTATTCTTTA
AACATTCCGT TTATAAGAGC TCTGCGTGAA TTTACAACAC CCGCCTTTTT GGATATATTA
AAAAGGTCGG GCTTTACAAC CTTTAACCGT TCGGCAGATG AGTACGGTCT TCCCCTGATT
TTAGGAGGTG GAGAAATAAA CCTGTACGAA ATTACAAACA CTTATCGAAA GATGATGCTG
AGAGCTCAAA ACAAACTTGA CGAAAAATTT CCTTTTTCTT CAGGAGCTTG CAGAATAACA
ATGGATGTGC TGACCGAAGG GAACAGGCCC GAAGAAGAAG CTATATGGCA GCTCTATGCA
CAAAATCAAA AAATTGCATG GAAGACCGGA ACAAGTTACG GGAACAAGGA TGCTTGGACT
ATAGGCATTA CGCCTAAATA TTCCGTGGGC GTTTGGTGCG GAAACGCTTC GGGAGAAGGA
AGGCCTGAAA TTACAAGCAC AAAACTGGCC GCTCCAATCC TCTTTGAAAT TTTTAATATC
TTGCCAAAAT CGGACTGGCC CGAAAAAGAA TTAAAGGATT TTGAATTTAT AAAAGCTTGC
GCAGACTCAG GTTACCCCGC AGGAGAATTT TGTAAAACGG CAAAGGCTGT TTTAAAACCC
ATAAACAGTC ATATCCAAAA TACCTGTCCT TATTGTAAAA AGGTATCTTT AAGCCCCGAC
GGCAAGTTTC AAGTTAAGGC AAACGACATA AACGAATTAC CTAAAATAGA AAACAGGTTT
GTCCTTCCGG CTGCTGCAGA ATATTTTTAT AAACAGGGCC ATCCGGAGTA TAAGAGCCTT
CCCCAATGGC TTCCCGAAAG TACGGCATCA AATACAGGCG AGTTTGAAAT TCTATTTCCC
GAAGACGGAA CCTCGGTTTA TATTCCGACA GAACTTGACG GCTCTTTTGG AGCCTTGGTT
GCAGAAGCCG CCCATAAAAA TCCCGATGCG GTCATCTACT GGGATTTGGA CGGAGAATAT
TTAGGAAGTA CAAAATCCTA TCATCAAATG AAGATTCAGC CCTTGAGGGC GGCCGTAAGG
GGCAGACATG AGCTGACCCT TACGGACAAC AGGGGAAATA CCCGTAAAAG AATTTTTTAT
GTTCTAAATG GAAATTAG
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| Protein sequence | MDFPKKLPIK NILKASMPAF ISSLIFLALI LFFTPGFKVD YSFTLYSSNG KLLGASAAID
GQWRFPQTSK LPEKYREALL SYEDKNFYFH FGIDPLSVFR AAVENILKGK IVSGASTITM
QTSRLSEKNP VRNFKQKLRE SFLSLFFELS YSKENILNIY ASHAPYGGNV VGLEAASWRY
FGRGPEDLTW AEAACLAVLP NQPSLVRPGK ESEILKEKRD RLLYNLFLQK KIDKETYALS
VTEPVPDKPK AIPQKAYHYL EFLKTKSSNQ KNISSLDYSL QEIIFEIADH HFKRNFSSGV
YNTAVLILDT ETGKPLAYIG NTGLQSPNAK NEHVDMVHAR RSSGSLLKPF LFAAMLDAGM
ILPDQLLIDI PTKIAGYTPQ NSNYTYSGAI PARKALSYSL NIPFIRALRE FTTPAFLDIL
KRSGFTTFNR SADEYGLPLI LGGGEINLYE ITNTYRKMML RAQNKLDEKF PFSSGACRIT
MDVLTEGNRP EEEAIWQLYA QNQKIAWKTG TSYGNKDAWT IGITPKYSVG VWCGNASGEG
RPEITSTKLA APILFEIFNI LPKSDWPEKE LKDFEFIKAC ADSGYPAGEF CKTAKAVLKP
INSHIQNTCP YCKKVSLSPD GKFQVKANDI NELPKIENRF VLPAAAEYFY KQGHPEYKSL
PQWLPESTAS NTGEFEILFP EDGTSVYIPT ELDGSFGALV AEAAHKNPDA VIYWDLDGEY
LGSTKSYHQM KIQPLRAAVR GRHELTLTDN RGNTRKRIFY VLNGN
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