| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2137 |
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| Symbol | |
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| ID | 2739396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2166265 |
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| End bp | 2171769 |
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| Gene Length | 5505 bp |
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| Protein Length | 1834 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637161027 |
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| Product | hypothetical protein |
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| Protein accession | NP_972738 |
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| Protein GI | 42527640 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGGCAT CGGTTTTTAT GGCCGGTTGT AAAAAAAATG ACCAAGCTTT GCAAAATGCA
ATGGATGATA TTGAAAGCAT AAGCTACGGA GCCTTAAAGC GGCTTGAGCC TATCAATGTG
ATCTTTAAGG AAGAAATAAA GCATCCTGAA AACCTTGAAA AGGCCTGCGT TTTAACGCCT
AAGCCTTCCG GAGAATGGAA GATAATGGGT AAAAATCAAA TTACCTTTAC TCCTTCATCA
GCCTACAGCT TTAAAACCGA TCTTAACCTG GAATTGGATG TAGGACTTCT CCTCGAAAAC
ACAGAGAAGA AAAAGGGAAT CAGCCTCACA TTCAACATAG CTCATCCTGA GTTTAAACTT
ATATCGGGAG AACTAATCCC CGACGAAAAA AAAGAAAATA TTTTTAGATT TGAAGGTATC
GGCGAAACCG ATATACCTGA AACTCTTACC TCAATAGAAA AAATGCTTAC AGCCGATTTA
AAAATGGGAA ATTCAAAGTC AAACCCTGCT ATAAAGGTTA GCCAAGGGGT CGCCTCCAAT
CAATATAAAA TCAGCATAAA AGAGATAAGC AGAAAAAAAC AAGTTCAAGA ATTGAATCTC
TCATGGAATT TGGAAGCTCT CGGCGGAGAG GGCTCAAGTT CTGCAAGCTT TACCGTAGCA
GCCATATCGG TTTTTCAGGT AACTTCTTTT TCTCAAGAAA CGGGAAGCGA AATACAGGTA
AACTTTTCGG ATATGCTGGA CTCTTCACAA GATTTAAGGG GCTTTATAAA ACTTGAATCG
TCTCCCGAAA TGCCTTTTAG ATACAGTATT GACGGATATA AGCTTAAAAT CTTTTCTCAA
AACGGGCTTT TCCCCGATAA TACACGCTTA TCGGTACTGC CCGGCATAAA AAATTCAAGA
GGAAAAAAAC TTGAAACCCA AGCCGATTTT TCCATAACGG TTGCTTGGGA AAAACCCTCA
ATACGCTTTA CAAAGGCCGG AAACATAATT CCTGCAAAGG AAATGTCCGT CCTTGTTTCT
ACAAAAAATA TCAGCGGACT TATGCTCGAA GCCTTTCAGA TCTACGATAA AAATATGACG
CAATTTCTCC AGATAAATAC TATAGACGGA AGCTATGAGC TAAACCGCGT AGGAGAACCC
GTCTGGCGGC AGAGCTTTGA CCTTGAATGG AACAGCTCGA TGAAAAACAA AACGGTTCAA
CACTCCCTCG ACATCAGCAA GCTGATAAAG AAATTCCCCG GCGGTATGTT CGAACTTCGT
GCAAGTTTTA CAAAAAAGCA CAGCATGTAT GAATCATCTT CCAAATCCAA CGAGTTTTCA
CACCTTCCCT TCCCCAAGGA TATAAGCGAA ATTGAAAACT TTAAAAACAT CGAAACCGAT
TATTGGAATA ATTCCGATAT AGAAGATGAA GACCGCTATA AATTTTGGTC GAACAGGGAA
AACCCGAACC ATCCGGCCTT TTACCTTCCG TCATACAGCA ATTACTGTAT GGCAATAAAA
AGAATTCTGG TTTCAAACAT AGGCTTATCG GCAAAAAAAG ACAGGGAAGG AAAACTTTAC
ATCAGTGCTG CCGACCTATT GACGGCCGAA CCTATGAGCG GTGTAAATAT AAGTTTATTT
AACTTTGCTC AAAAAGAATT TGAATCAGGC AAAACCGACG GCGACGGGCT TTTAATGCTC
AAAAATGAAA ACGATGCCTT CCTTATAAGA GCCGAAAAAA GCGGAGATGT AAACTGGCTT
CCCCTTAATT CCGAAGTGCT TTCTACAAGT CATTTTCAGG TAGAAGGAGA GTCTTCAAAA
AAAGGAGTTA AGGGTTATAT TTATGGAGAA CGCGGGGTTT GGCGCCCCGG AGACGATATT
CATCTTGTAT TTATTTTACA GGATTTGGAA AAAAATCTCC CTAAAGATTA CCCCGTTAAA
TTCTATCTTG AAGACCCATT AGGCAAAAAA ACGGATACTA AGGTTTTTAC TTCCTCGGTG
GACGGTTTTT ATAGGATAGA TACAAAAACC AATGTTCAAG ACAAGACCGG TACTTGGTAT
GCAATAGTTA CAGCAGGAGG AAAGTCTTGG TCTAAGAGCA TAAAGGTTGA GTCCATTGTA
CCCAACCGTC TTTTTGTAAA CCTTGATCCT AAGGCAAAAT ATTTTTCCGA AGGCTATAAT
CCGGCGGTGC TTGGAGGCGA GTGGCTCCAT GGGGCAAAGG CTTCCGGCTT AAAGGCCGAA
ATTTCAGCCC GCTATGTTTT AAACCGGACT CCTTTTGAAA ATTATAAAAA CTATAATTTT
ATAAATCCCG AACTTAGCGT ACAACAAGAC TCAAACAAAA TTTGGGAAGG TACCCTAAAT
GATTCGGGAA AAGCCGACAT AAATCTTTAT CTTTCATCCG AAGCAAAAGC CCCCGGAAAA
CTAAAGGCAA TTTTTGAAAC AAGAATATAC GAACCTTCAG GTGCCTTTTC TACGGAAAAC
AAGGTCTTTG ATTATTCGCC CTATTCACGC TATGTCGGAA TGCAGATTCC TAAAAGCGAT
GATGAGTATA GGGATATGCT TTACACCAAT AAGGACCAAA CCCTATATTT TGCGGTTTTG
GATCCTGAGG GAAATCCCGT AAAAGAAGGC GTAAACTTAA GCGTAAACCT TTATAAGCTG
GAATGGTATT GGTGGTGGGA AGCAGATGAA GAAAGTGCCA ACTATACAAA TTCAAGGTAC
ACTCAACATA TAAAAAACTG GAATATTTCG GCAAAGGGCG GAAAGGCCGA ACTTAAAATG
AAGGTTACAG ATGGAGATTG GGGCAGGTAT TTGATTACGG TTTCAGATCC GAACGGAGGG
CACAGCTCGG CTCAGGTAGT ATATTTTGAC TGGGAAGGAT GGGCCAGCCG AAAAACAAGC
GATGAGTCAA GCGATTCAAT CATCATGCTC ACAACCGATA AAGCAAAATA CTACGCCGAT
GATACTGCCG AAATTACATT CCCCGGATAC GAGGGAGCAA AAGCTCTCAT AACACTCGAA
AAAAACGGCA GGGTTCTAAA GCAAGAATGG ATAAAATCCA AGGGAAAAAT TTTCTCGTAC
AAATTAAAAC TTGATCCCTC GATGGCTCCG AACATCTACG CCCACGTAAG TTTAATACAG
GAGCACAGCC AGACAAAAAA CAGTCTGCCT ATAAGAATGT ATGGCATAAC TCCCGTAATG
ATTGAAAACA AATTATCAAG ACTAAGCCCC GTGATACAAG CGGAACAGAG CTATGAACCC
AACAGCAAGG TTTCGTTTAC GGTAAGCGAA GAAAAAGGAA GACCTATGAC CTTTACGGTT
GCCGTTGTAG ACGAAGGACT CTTGGGTCTT ACAGCCTTCC ATACAGGTAA TCCTTGGGAC
AGCTTTTATA AAAAAGAGTC CTCGCAAATT ACCTCTTGGG ATGTTTATAA ATACGTAATC
GGAGCCTACA GCGGCAATAT AGAATCGATT CTCTCGGTCG GAGGAGGAGG CTTTATAGAT
AACAAGACCT CAAAGAATGC GGAACGCTTT AAACCGGTTG TTTACTTTTT CGGCCCCTTT
GAAATCAAAG CAAAGGAAAA GAAAACAATC GAATTCGATC TTCCTCAGTA CATCGGAGCC
TTGCGTATTA TGGCAGTTGC AGGAAAGGAC GGAGCCTACG GTATAAAAGA AGAAACCGTA
AAGGTAAAAA GCGATCTTAT CGTAATGCCT ACCCTTCCCC GCACCATGGG CATAGGAGAA
ACAATCGAGG TTCCGGTAAC AGTCTTTAAC GGAACTTCTT CCGAAAAAAA AGCAAAGGTG
GTTTTAAAAA GCGAGGGAGC TATAAATATA AGCGAAACAA AAGAGGTAAG TATCCCTGCA
AATTCCGACT CTTCCGTTTT CTTTAAGGTA AAAACGGATA AGGGCGGCAT CGCAAAATTC
ACGGCGGAAG CCTCGGCCTC AGGCATTTCA AAAACGGCAA AGGCCTTTAC CGAAATAGAT
GTGCTTTCCA GAGGAATACC CTACTCTACA GTCGAGCTTA TAAATATTGA AGCCGGAAAA
ACATTTGCTA AAACCGTTCC TCTAAAAGGC GAAAACGGAA CAAAGAGTTT AAGCGTAGAA
ATTTCTCAAA TGCCGGCCCT AGGACTTGAA AACCGTCTGG CCTATCTTTT AGGTTATCCT
TACGGCTGTA TCGAACAGAT AACATCCAAG GCCTTCCCCC AATTATACCT AAACACGATA
ACGGCCTTGG ACCAAACGGA AATCGATAAG GCAAAGAGCA ATGTAAACTC GGTTCTAAAC
CGCTATATAA ACTATCAGCT TAGGTCCGGC GGATTCAGCT ATTGGCCGGG AGGCGGATAT
GAAACTTCGT GGGCTACAAA CTATGCAGGA CACTTTATGG TCGAAGCAAA AAAGGCCGGC
TATGAAGTAA ATGACAGCAT CTATCAAAGC TGGCTTTCTC ACCAAATCGA CATGGCAAAA
AATTGGGCAG GCACCTATGC GGACAGCATG GAAACTCAGG CCTACCGCCT ATACACCCTT
GCCCTTGCAG GTAAACCGGA AATAGGAGCT ATGAACCGTT TAAAAAATAT GGAGCAAAAC
CTCAACTCCG TATCAAAGGC CTTCCTCGCA AATGCTTACA GTCTTGCAGG CCACAGCAGT
ACGGCCAAGG CAATGCTCGA AAAGCTCTAT GAACCTACCA CAGTTTATAG GAGCACGGGC
GGAAACTATT CGTCCAATAT CAGGGACTTG GCCTTAATCT TAAATGCTTA CACCACGGTC
GGCGAAACCG CAAGGACTAC AAACCTTATT TCAAAGCTTG CTAAAATTTC TTCAAGCAAC
GATTGGCTTT CGACACAGGA AACGGCTTGG ATTCTTTTAG CCCTGGCCCC TCACTACGCC
TTCGACAAAA ATAAGAGTGC AAACTATGAG GTTGTAACCG AAGGAAATGT AATCAAGGAC
AAATTGAACA ATACATCTAA ACTCCATAAT ATTCCGGTAA ATACCGAAAC GGCAAAAAAG
ATGGAAATTA AGAATACGGG AAATACACCT ATCTTCGCTG CTATAAACAC GGCAGGAAAA
CTTAACCCTG GAAGCGAAAC CCGTATTGAA GAAAACTTAA AACTTTCGGT TGTATATCAA
AACGAGGATG ATCAAGAAGT TTCACCCGAG ACCTTAAAAA AAGGACAGAG GTTTAAGATG
AGGGTAAGGG TCGACAATAA GACTCAAGGC GCCCTTGAAA ACCTTACCCT TTCAATCCCC
ATTCCGACAG GCTGGGAAAT TACAAACACA AGGCTCGGAG GCGATGATGA TACGGATTCG
GAAGACGAGC GCAACACAAG GCAATTATAT GACTTCCAAG ATTTAAAGGA TACTCATATT
TACACTCACT TTGCCTTGGA CGGCTACGGC ACAAAGAACT TTGAGTTTAC GGGAACCGTA
ACATACGGAG GAGAATACTA TATACCGGCA ATCTTTGTCG AAGCTATGTA CGATTATGCT
TATAGAGCAG TCATCCCCGG CACAAGGGTA AAAGCGTTTG ATTAG
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| Protein sequence | MSASVFMAGC KKNDQALQNA MDDIESISYG ALKRLEPINV IFKEEIKHPE NLEKACVLTP
KPSGEWKIMG KNQITFTPSS AYSFKTDLNL ELDVGLLLEN TEKKKGISLT FNIAHPEFKL
ISGELIPDEK KENIFRFEGI GETDIPETLT SIEKMLTADL KMGNSKSNPA IKVSQGVASN
QYKISIKEIS RKKQVQELNL SWNLEALGGE GSSSASFTVA AISVFQVTSF SQETGSEIQV
NFSDMLDSSQ DLRGFIKLES SPEMPFRYSI DGYKLKIFSQ NGLFPDNTRL SVLPGIKNSR
GKKLETQADF SITVAWEKPS IRFTKAGNII PAKEMSVLVS TKNISGLMLE AFQIYDKNMT
QFLQINTIDG SYELNRVGEP VWRQSFDLEW NSSMKNKTVQ HSLDISKLIK KFPGGMFELR
ASFTKKHSMY ESSSKSNEFS HLPFPKDISE IENFKNIETD YWNNSDIEDE DRYKFWSNRE
NPNHPAFYLP SYSNYCMAIK RILVSNIGLS AKKDREGKLY ISAADLLTAE PMSGVNISLF
NFAQKEFESG KTDGDGLLML KNENDAFLIR AEKSGDVNWL PLNSEVLSTS HFQVEGESSK
KGVKGYIYGE RGVWRPGDDI HLVFILQDLE KNLPKDYPVK FYLEDPLGKK TDTKVFTSSV
DGFYRIDTKT NVQDKTGTWY AIVTAGGKSW SKSIKVESIV PNRLFVNLDP KAKYFSEGYN
PAVLGGEWLH GAKASGLKAE ISARYVLNRT PFENYKNYNF INPELSVQQD SNKIWEGTLN
DSGKADINLY LSSEAKAPGK LKAIFETRIY EPSGAFSTEN KVFDYSPYSR YVGMQIPKSD
DEYRDMLYTN KDQTLYFAVL DPEGNPVKEG VNLSVNLYKL EWYWWWEADE ESANYTNSRY
TQHIKNWNIS AKGGKAELKM KVTDGDWGRY LITVSDPNGG HSSAQVVYFD WEGWASRKTS
DESSDSIIML TTDKAKYYAD DTAEITFPGY EGAKALITLE KNGRVLKQEW IKSKGKIFSY
KLKLDPSMAP NIYAHVSLIQ EHSQTKNSLP IRMYGITPVM IENKLSRLSP VIQAEQSYEP
NSKVSFTVSE EKGRPMTFTV AVVDEGLLGL TAFHTGNPWD SFYKKESSQI TSWDVYKYVI
GAYSGNIESI LSVGGGGFID NKTSKNAERF KPVVYFFGPF EIKAKEKKTI EFDLPQYIGA
LRIMAVAGKD GAYGIKEETV KVKSDLIVMP TLPRTMGIGE TIEVPVTVFN GTSSEKKAKV
VLKSEGAINI SETKEVSIPA NSDSSVFFKV KTDKGGIAKF TAEASASGIS KTAKAFTEID
VLSRGIPYST VELINIEAGK TFAKTVPLKG ENGTKSLSVE ISQMPALGLE NRLAYLLGYP
YGCIEQITSK AFPQLYLNTI TALDQTEIDK AKSNVNSVLN RYINYQLRSG GFSYWPGGGY
ETSWATNYAG HFMVEAKKAG YEVNDSIYQS WLSHQIDMAK NWAGTYADSM ETQAYRLYTL
ALAGKPEIGA MNRLKNMEQN LNSVSKAFLA NAYSLAGHSS TAKAMLEKLY EPTTVYRSTG
GNYSSNIRDL ALILNAYTTV GETARTTNLI SKLAKISSSN DWLSTQETAW ILLALAPHYA
FDKNKSANYE VVTEGNVIKD KLNNTSKLHN IPVNTETAKK MEIKNTGNTP IFAAINTAGK
LNPGSETRIE ENLKLSVVYQ NEDDQEVSPE TLKKGQRFKM RVRVDNKTQG ALENLTLSIP
IPTGWEITNT RLGGDDDTDS EDERNTRQLY DFQDLKDTHI YTHFALDGYG TKNFEFTGTV
TYGGEYYIPA IFVEAMYDYA YRAVIPGTRV KAFD
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