Gene TDE2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2131 
Symbol 
ID2739390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2162180 
End bp2162773 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content43% 
IMG OID637161021 
Productcobalt transport protein CbiM 
Protein accessionNP_972732 
Protein GI42527634 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID[TIGR00123] cobalamin biosynthesis protein CbiM 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATAT CCGATGGAGG ATTATCGACG GCGGTTTGTG CCGTAGGTTA TGCGGCAAGT 
GCGGTAGGAA TTGCCTTTGC CGTCAAAGGA ACAAAAGAAG AGGATATCCC GAAAATAAGT
CTTATGGCGG GAACTTTTTT TGCTATTTCA TTGATTATGA TTCCGATACC GCCGAGCTCG
GTTCATCCGC TCATGTGCGG ACTGATAGGA ATTATTGTAG GGCGTAGGGC GCCCCTTGCA
TTTTTTCCCG CACTGCTGCT GCAAGCCCTT TTATTTCAAC ACGGCGGGAT TACAACCCTC
GGAGCTAACA CTCTGATGCT TTCTATTTCT TCAATATTAT CTGCAATTAT TTTTTATAAT
TGGAAAAGCG ATAATGTGCT TTTAAAGGGA ATGGTTGTAG GAGCCTTGTC TGTTATCTTT
GTTGTTTTGG TTTTATCGGT TCTTCTTATG ACGGGCGGAA GTTTTGCAAA AGAAACATTT
ATAGCTATCT TTGTTTCTCA TTCCGTAGTT ATGGCGGTCG AGGCTGTAAT TACCGGTTTT
GCCGTCAAGC TTATGATGAA GGCGAGGCCC GATTGGTTTA AACGGAATTT ATAG
 
Protein sequence
MHISDGGLST AVCAVGYAAS AVGIAFAVKG TKEEDIPKIS LMAGTFFAIS LIMIPIPPSS 
VHPLMCGLIG IIVGRRAPLA FFPALLLQAL LFQHGGITTL GANTLMLSIS SILSAIIFYN
WKSDNVLLKG MVVGALSVIF VVLVLSVLLM TGGSFAKETF IAIFVSHSVV MAVEAVITGF
AVKLMMKARP DWFKRNL