| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2080 |
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| Symbol | |
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| ID | 2741207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2109139 |
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| End bp | 2111574 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637160970 |
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| Product | cytidylate kinase/ribosomal protein S1 |
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| Protein accession | NP_972681 |
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| Protein GI | 42527583 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0283] Cytidylate kinase
[COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00017] cytidylate kinase
[TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATAG CGATTGATGG ACCTGCAGGC TCAGGCAAAA GTACTCTTGC AAAGATGCTT
GCTGAACACT TGAACATTAC ATTTATGAAT ACGGGTAGTT TTTATAGGGC CTTGGCTCTG
GCTGTACTGC GTTCTTTCGG AGGCGGAAAT GACGGAAGCG GCGGACAAAC TCCCGATCTT
TCGGATGAAA AAAAATGGAC CTCATTTGCA GAAAAGACGG AACTTTTTTA TATAAACGGC
TCCATGTTTT TAGGTAATGA AAATGTTGAG GCTTATCTTC GAAGCGATGC TGTAGAATCC
ATTGTCGCAC CTCTTTCAGC TATAGTTCCT ATAAGGCACA TATTAAATAA GAAAATTCGT
GAAGAAGCCG CTAAAACCGG AGCTGTTTGC GAAGGCAGGG ATATGACAAC CGTTGTTTTT
CCTGATGCCG ATATTAAGTT TTATCTTGAT GCTTCTGTAG AGGCCAGGGC AAAAAGGCGC
TTTGATCAGG GAACAAGCAA TCTTTCGCCG GAAGAAATAA AAAAAACGAT TCTCGAAAGA
GATGAGGTGG ATAAAAACAA AAAAGAAGGG AGCTTAAAAG TGGCTCCTGA TGCCGTGTAT
TTGGATACAT CGGACTTAAA TATAAATGAA GTTTATGAAA AAATGCTGGC AGAGGTGTCT
GCAATAATAT CGGCATCAAA GTCGGAAAAT ATCAATAATA AAGGGTTATC TATGGAAAAG
ATGGAAGTGG TAAAGGATGT TGAAAAAGAC TCCAACGGAA ACATCCAAGC ACAATTACAA
GAGGAGTACT TAAATAATTT TGAGGCTCCT GAGGCGGGGA CAATTAAAGA AGGTTATGTT
GTTGCTGTAA ACAACGGAAC CGTTTTTGTC GATGTAGGCG GTAAATCCGA GGGACATATT
CCTTTGGATG AGTTTGATGA AGAACCTAAG GTAAACGATA AGGTAACTGT ACTTATCGAA
AAAACCGAAA GCTCAAACGG TCATTTATCC GTATCAAAAC TCAAGGCCGA TAGGCTTATT
CTTCAAAAAG AGTTTAAACA GGCTTATGCC GATAAGACTC CGATTGATGG TACTATCGCA
AAGCAGGTTA GGGCCGGCTA TGAGGTAAAG CTTGGCGGCG GATTGACTGC TTTTTTACCT
TTGAGTCAGG CAGATGTATC CAGAGTTGAA AAGCCTGAAA CCTTGGTAGG CGTAAAGTCT
AAATTCTACA TTGAAAAATT AAGCTTTAAT TCACGCTCAG GTGAAAATAT TGTTGTAAAC
AGACGTAAGT ACATGGAAGG GCGTACCGAA AAAGAAAGAG ACGCCTTTTT TCAAAATACA
AAGATAGGCG ACACCGTAAA GGGAACGGTT AAGAGCTTTA CCAGTTTCGG CGCCTTTATC
GATTTGGGCG GTTTTGACGG CCTCTTACAT ATCAATGATA TGAGCTGGGG TCATGTAACC
CGTCCTAAGG ACTTCGTAAA GAAGGGTGAA GAAATAGAGC TTAAGGTAAT CCGTCTTGAT
CCGGAAAACA AGAGAATAAA CCTCTCATTA AAGCATTTTA CTCAGGATCC TTGGCTTCAG
TTTGAAGACA AGTTCCATGT TGAAGACATC GTTACCGGAA CGGTTACAAA GACAACGGAT
TTCGGCGCCT TTATTGAATT GGATGAAGGA ATCGAAGGTT TGGCCCATAT CAGCGAATTC
AGCTGGGTTA AGAAGATTAA TAAGCCTGAG GATATATTAA AGCCCGGAGA TAAGGTAACA
TGTATGATTC TCGGCTACGA TATTCAGGCC GGAAGAGTTT CTTTGGGTCT AAAACAGGTT
ACGGACAACC CGTGGGATAC GATTGAAGAG CGTTACCCTG TAGGAACCCG CTTAACCCGA
AAGGTCGTTA AAATTACAAA TGCAGGCGCC TTTATTTCTC TTGAAGAAGG TATCGACGGA
TTTTTACATG CAGACGATAT TTCGTGGATT AAACGCGTAA AACATCCGGG AAGCGAGCTT
GAAGTAGGTA AAGAAATCGA AGTTATCGTT ATCGAGTGCG ATGCCGAATC AAGAAGAATC
CGTTTGGGTA TTAAACAGCT TACCGATGAT CCTTGGGAAA AATTCGGAGC CGCTTATAAG
GTCGGTTCTA TTGTTGAAGG CGAAGTTTCC TCAATCACCG ACTTCGGTGT ATTTGTAAAG
GTTCCCGGAG ATATCGAAGG CTTAATCCAC AAACAAAATT TGGTTGAGTC CAGGGATGAA
ACACCTGAAG AAGCTCTTGC AAAATATGCC GTAGGAGATA AGATCAAGGC TGTAGTAATC
GAAATAAATC CGAGAAACAA AAAAACCGCT TTCTCAATTA AAGATTTTAA GCGAAAACAA
CAGCAGGAAG AAATTTCTCA GTACATGTCA ACCGAACAAG AAGATGATGA TTCATCTTAT
ACTCTTGGAG ACCTTTTAAA GAATAAACCG GAGTAA
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| Protein sequence | MIIAIDGPAG SGKSTLAKML AEHLNITFMN TGSFYRALAL AVLRSFGGGN DGSGGQTPDL
SDEKKWTSFA EKTELFYING SMFLGNENVE AYLRSDAVES IVAPLSAIVP IRHILNKKIR
EEAAKTGAVC EGRDMTTVVF PDADIKFYLD ASVEARAKRR FDQGTSNLSP EEIKKTILER
DEVDKNKKEG SLKVAPDAVY LDTSDLNINE VYEKMLAEVS AIISASKSEN INNKGLSMEK
MEVVKDVEKD SNGNIQAQLQ EEYLNNFEAP EAGTIKEGYV VAVNNGTVFV DVGGKSEGHI
PLDEFDEEPK VNDKVTVLIE KTESSNGHLS VSKLKADRLI LQKEFKQAYA DKTPIDGTIA
KQVRAGYEVK LGGGLTAFLP LSQADVSRVE KPETLVGVKS KFYIEKLSFN SRSGENIVVN
RRKYMEGRTE KERDAFFQNT KIGDTVKGTV KSFTSFGAFI DLGGFDGLLH INDMSWGHVT
RPKDFVKKGE EIELKVIRLD PENKRINLSL KHFTQDPWLQ FEDKFHVEDI VTGTVTKTTD
FGAFIELDEG IEGLAHISEF SWVKKINKPE DILKPGDKVT CMILGYDIQA GRVSLGLKQV
TDNPWDTIEE RYPVGTRLTR KVVKITNAGA FISLEEGIDG FLHADDISWI KRVKHPGSEL
EVGKEIEVIV IECDAESRRI RLGIKQLTDD PWEKFGAAYK VGSIVEGEVS SITDFGVFVK
VPGDIEGLIH KQNLVESRDE TPEEALAKYA VGDKIKAVVI EINPRNKKTA FSIKDFKRKQ
QQEEISQYMS TEQEDDDSSY TLGDLLKNKP E
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