Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2056 |
Symbol | |
ID | 2740650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2083949 |
End bp | 2085160 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160947 |
Product | outer membrane hemin-binding protein A |
Protein accession | NP_972658 |
Protein GI | 42527560 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000993982 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAATA AAAGAATGGG TGCAAAGATT GCACTTATAC TGGTTACACT CGCAGTTATT TTTACTGCCT GTAAAACAAT GCCTGCTGCA AAAGATAATA AGCTTGCAGC CGGAATGGAG TTGGCCGCCT GGAAGGGCGA GTGGGTTTCA GCAGATATCA TAAAAAACAA CCCGTCTTTA AAAGCAGCTT ATAAAAAAAC AGCTGCAGAT ATGCGCTTTT ATACACCTGA AGGCCTTGAA GCTGCTGCCT TGGACATGTA CAAAACACCG GCGGTAAAGG CAAAATTTGA CGGTACAAAC ACTGTTCTTT TTACATATTT GGATAAAGAC GGTAAAGAAA TACAAATTTC AGTCAAATAC AAGTACTTGG GACAAAAAGC TGATGGTGAG TATCCCGATT CTATGTGGGA GACTTTTGAG GCTGTAGAAG ATAAGCTTGA TAATGCAAAC TTTAAGTATT TTATATCAAT GCCTCCTCAT GCTCATGGTG ACGGACCAAA GCACTGGCAT GCCCGTTTTG GAAAATACGG TATTGACAAC CTTGTAACCG GTGCAGGAAG ATGGCCTACG TACTATTCTT CATCTACACC TGAAGCTGAG CTTGTTAAGA TGTTTGAATC TTCAATCCCA AATATGCCTA AATGGAATCC TGCTTCTCCC TTTGAATCCT ATGCCAAGTA CGGCAAATGG ATCAACTCTT TATCTATTTT TGAAAATACA AGTAAAGAAG TTGAAGCTGC CTATGCAAAG GTTATAAAAG AATTTGCAGG CAAAAATCCC AAGGGCGGAG ATTTTACAAA GGCTGAAATT ATTGCCGAAT TACAAAAAGG AAATAAATCC GTTAAAGATT ATTCCCACAT GGAGTTTATT GTAAAAGACG GAAAAAATGA ACTTGTTTTC TATAAAGGAA ATAAAGAGAT CTTTAGATCA AGCTATGTTC GTGTTGGTGC AAGTCCTTCA AAGCCGTATA TGACGATGAA GGCTGAAAGA AAAGATGCCG GTATGTTTTC TTTGATTTCA TTTGTAGTTG TACACGGTAA AGCTCCGATG CTGCATTTCC ACTTGTGGTA CGGTAATAAC GAAAAAGAAA TTGAAGAGTT TGAAGGAACA CCTACTTGTT ACAGGACAGC TCTTACAGAC GCTGAAATTG CAGCAGCTGT AGAGAAATCT GCAAGAACTC TTTTAGAAAG ATTAACAAAG GCTAAAAAAT AA
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Protein sequence | MVNKRMGAKI ALILVTLAVI FTACKTMPAA KDNKLAAGME LAAWKGEWVS ADIIKNNPSL KAAYKKTAAD MRFYTPEGLE AAALDMYKTP AVKAKFDGTN TVLFTYLDKD GKEIQISVKY KYLGQKADGE YPDSMWETFE AVEDKLDNAN FKYFISMPPH AHGDGPKHWH ARFGKYGIDN LVTGAGRWPT YYSSSTPEAE LVKMFESSIP NMPKWNPASP FESYAKYGKW INSLSIFENT SKEVEAAYAK VIKEFAGKNP KGGDFTKAEI IAELQKGNKS VKDYSHMEFI VKDGKNELVF YKGNKEIFRS SYVRVGASPS KPYMTMKAER KDAGMFSLIS FVVVHGKAPM LHFHLWYGNN EKEIEEFEGT PTCYRTALTD AEIAAAVEKS ARTLLERLTK AKK
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