Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2053 |
Symbol | |
ID | 2740647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2081779 |
End bp | 2082213 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160944 |
Product | NifU domain-containing protein |
Protein accession | NP_972655 |
Protein GI | 42527557 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01994] SUF system FeS assembly protein, NifU family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.415003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATAG ATACGATTTA TCAGGAAATG ATTCTAGAAT ACTCCCGAAA AAAAGAAAAC TGCCGCGAAC TTTCCGGCGA AGGAGTAAAG ATAGAAAGAG GCCATAACCC CTCATGCGGT GATGACCTTA CCCTGCTTAT CCGGGAAAAA GACGGAATCA TAGAAGATGC TTCTTTTTTA GGAAGGGGCT GCGCCATTTC TACGGCTTCT ACAAATATGC TGATTGAACT TATAAAAGGA AAAAATGCCG AAGAAGGAAA ACGCAAGGTA GAAATATTTT TTAAGATGAT GAACGGAAAA GAAATTTCGG AAGAAGAAAA GGAAGAATTG GAAGATGCTC AAATCTTGGA ATATTTTGCC GAAATGCCGG CACGTATAAA ATGTGCAACT TTAAGCTGGC ACAGTGCCGA TGTTCTTTTA AACGAAAAAA AATGA
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Protein sequence | MDIDTIYQEM ILEYSRKKEN CRELSGEGVK IERGHNPSCG DDLTLLIREK DGIIEDASFL GRGCAISTAS TNMLIELIKG KNAEEGKRKV EIFFKMMNGK EISEEEKEEL EDAQILEYFA EMPARIKCAT LSWHSADVLL NEKK
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