Gene TDE2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2005 
Symbol 
ID2740458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2023916 
End bp2024470 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content39% 
IMG OID637160895 
Producthypothetical protein 
Protein accessionNP_972608 
Protein GI42527510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0591138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCCA TTGCCGCAAT GACCGGCATA ACAGCCGGGG CTTTGTACAA ACACTTTCCG 
TCAAAGGCGG CAATATTTGA AGCTCTCGTA CAGCCGCTTA TCGGACAAAC CTTAAGTATC 
GGTTCCGATT TTTCCGAAAT CGCAATACAT TTATATGAAA CTAAAGACTT TTTATCAACA 
AAAGAAGCAA TACGCATATC TTTACAGAAT TTATGTACGC TTGTCTACAG CCGCTTCGAT 
GATTTTAGAC TTTTGTTTAA CCGCTCGGCG GGAACAAAAT ATGAAAACAT CCGTCACGAT 
TTCGTCATGG CTGATGTTAC AGCCTGCAAA AAATTCATTG CCGACTTAAA AAAACGCGGC 
ATAAATGTCC GGCCCTTAAA CGACGACCAG CTTCACTTAA TTTACAGCAC CGCCTTAACA 
CCTCTTTTTG AAATCATCAC ACATGAATAT TCTTATAAAA AAGCCCTATC CTTTATAGAT 
ATCTTAACCG ATGTAATGTA TTTTTGCTGG AATAAAATTA TGCAGCCGGA AACGGAAATA 
AACAAAAAAA ATTGA
 
Protein sequence
MRSIAAMTGI TAGALYKHFP SKAAIFEALV QPLIGQTLSI GSDFSEIAIH LYETKDFLST 
KEAIRISLQN LCTLVYSRFD DFRLLFNRSA GTKYENIRHD FVMADVTACK KFIADLKKRG 
INVRPLNDDQ LHLIYSTALT PLFEIITHEY SYKKALSFID ILTDVMYFCW NKIMQPETEI 
NKKN