| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2003 |
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| Symbol | |
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| ID | 2740456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2022417 |
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| End bp | 2023691 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637160893 |
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| Product | internalin-related protein |
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| Protein accession | NP_972606 |
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| Protein GI | 42527508 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000199876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAG AATCGAAAAA ACTGTTTATA ACAATACTGC TTGCAGCGGG ATTGTTGACC
GCTGTCGCTG CGACGGAAAA CGCAGGCAGG GCGGTACTTG GTATAAGCCC GCATGAAAAA
GAGATAACCG TGACGGCGGT AACGGCAGAC GGCTCGCCCG TACAGGTAGA AGGCTGCACG
GTTACGGAAT TCCCGAGCGG CGAAGAAACG GTACTTACGG CAACGGGAAC AAAGGTTGTC
CTTAAAGGTG CTCTTATCGA GCTGTTCTGT TATGCTAACA AACTTACCGC GCTTGATGTC
CGCGGTTTAA CGGCTTTGCA GGAGCTGTAT TGCCAAGACA ATATGCTTAC TTCGCTTGAT
ATACGGGAAT TAACCGGCTT ACATACGCTG TATTGCGGCA ATAATCGGCT TACCGCACTG
GATATACGTG GGTTGACCGC TTTGCGGAAG CTGTACTGCA ATAGTAACGA AATCGCATCC
CTCGATGTAC GGGGGCTTAC CGCTTTACAG ACACTGTACT GTGACAATAA CCGGCTTTCC
TCCCTTGATG TACGGCACCT TACCGCTTTA CAGTGGCTGG ACTGCCACTT CAATAAACTG
ACATCACTCG ACGTGCAGGG CTTACCTGCT TTACAGGTAC TGGAGTGCTC GGATAATCAG
CTTACCTTGC TTGATGTACA GGGGTTGCCC GCTTTGCAGA AGCTGTACTG CCAAGACAAT
AAGATTACTT CGCTTGACGT GCGCGGTTTA ACCTCTTTAC AGGTACTGAT GTGCTACGAC
AATCGGCTTA CCGCACTGAA TGTACGCCGT TTGACTGCTT TACAGGAGCT GAATTGCAGT
TCCAATGCAA TCGCTTCCAT CGATGTACGG GGACTTACTG CGCTACAGGT GCTGTACTGT
GACAATAACC GGCTAACATC CCTCGATGTA CAGGGGCTGA CAGCTTTACA GGAGCTGGCG
TGCTCGGATA ATCAGCTTAC CGCACTCAAT GTGCAGGGCT TACCCGCCTT ACAGGCGCTG
GGTTTTCAGG ATAACCGCCT TGAAGAAGAC GCCCTTATAC GGATACTCAA CAGTTTGCCC
GACCGCAAAA CGGACGAAGA AGGCCTCGCC GTACTGTACA GCGAAGGGGA GAAGCTCCCT
AAAGAAAGCG GGTCAGCCGT TCCCGCCTCA GCCGAGTTTC GAGCGGCTTT CAAAGCTGCA
AAACAAAAAA ACTGGAAGCT GTACATGCAA ACCGAAGATG GAGACGGTAC GGAAATTCGG
TTGCAGGAGG AATAA
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| Protein sequence | MMEESKKLFI TILLAAGLLT AVAATENAGR AVLGISPHEK EITVTAVTAD GSPVQVEGCT
VTEFPSGEET VLTATGTKVV LKGALIELFC YANKLTALDV RGLTALQELY CQDNMLTSLD
IRELTGLHTL YCGNNRLTAL DIRGLTALRK LYCNSNEIAS LDVRGLTALQ TLYCDNNRLS
SLDVRHLTAL QWLDCHFNKL TSLDVQGLPA LQVLECSDNQ LTLLDVQGLP ALQKLYCQDN
KITSLDVRGL TSLQVLMCYD NRLTALNVRR LTALQELNCS SNAIASIDVR GLTALQVLYC
DNNRLTSLDV QGLTALQELA CSDNQLTALN VQGLPALQAL GFQDNRLEED ALIRILNSLP
DRKTDEEGLA VLYSEGEKLP KESGSAVPAS AEFRAAFKAA KQKNWKLYMQ TEDGDGTEIR
LQEE
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