| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1988 |
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| Symbol | |
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| ID | 2740441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2002879 |
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| End bp | 2005650 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637160878 |
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| Product | hypothetical protein |
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| Protein accession | NP_972591 |
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| Protein GI | 42527493 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.36521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGAATA TGCAATGCAA AATAAAATTC GTCTTTTTTA TTTCCTTTTT AACCTGTGCA
TTTATACAGC TAAATGCTCA AAATCTTTTT GTTCAAAAAA CCAAGTATTT CGATATAATT
TATTCTCCGG TATCGGAAAA GACGGCAGCC TTGATTTCGG AACATGCGGA CAATTATGCC
GAAGAAATTT CTCAAAAACT AAACCGTAAA ATTCCAAAAA GAATGCCCAT CTATATTGAA
GGCGGAAAGG AAGCCTTAAA CGGTTATTAT ACCTTTTTTC CGTACCGCCG GATTGTTCTT
TTTGATACCT TGCCGGAAGA AGGTCAGCTA AGCAATTTAA GCGATATAAT CTTAAAAGTC
CTCTATCATG AATTAACCCA TGCAATTTCA CTCACATATT TTTTGCCCCT CCTCCCAATG
TCCTTTACCG AGGGTGTTGC CGTTTCGTAC GAAAGTGCGG AAGACGATCA GGGCAGACTA
AACGATCCCC TGATAATGCA CCACCTAATG CAGGGGCGGC TTGAAAATGC AAGTCCTTCA
TGGAAACAGG CGGCAGGAGC TAGAGATGTT TACCCCGGCG GACTTTGGCC TTATATTTAC
GGCGGAGCCT TTGCCCAATA TCTTCAAAAA ATTTACGGAA TGGAAACCTA TGTAAAATAC
TGGGCTAATC CTCTTTCCTC TTTTCCTCAG GGAAAAACAA AAAAGATTTT TGACAAGGAA
CTTGATAAAC TTTGGAATAA TTTTTTAGAA TCGATTTACT TTCCCGAAAA GGCTCTCAGT
CCTCAAAATC CGATTAAGGA AGCCGGAGGT TTTAGTCTTA TTGCAAGCTC TAAAGACGGC
TTTGCCTGTT TTGATTTTAC AACAAAAAAC GTAATATTTT TTGACGATTC GGGAAAAGAA
GAAAAACTTT TTACTGCAAA CCCTACCCTT TCTTTTTTAA GTTTTTCGCA AGACGGAAAA
TTTCTTTTGG TAAGCGATTT GGTGAATACC CCTCACGGCG AACACAATAG GGCAACCATC
TTTGACATGC AGAAAAAAAA GTTTTTAAGT AAAGAATTTC TGTCTTTAAG GTATGCGTCC
TTTTGCGGGG AAGCGCTTTG CGGAATCGAA ATAAAAGGTC AGTTTTCCGA ACTTGTTTTA
ATCGATCAAG AATCTTTTGA AAAAAAAGAA GGTCTTTCCA AGACCGGTCT TTTAAAGGCA
GGGCCGGGAC TCCCCTATTC GGCTATTTAC AATCCCGTAT TTGCAGGCAA AAACAAAATA
GCCCTCATTG CCGCCAACGG AATAAACCGC GATATTCTGA TACTCGATAC GGCTTCAAAA
AAAATACAAA AACTTGAATT CGAAAATCAT CTTCCCGCAA TAAGATATTT ACAAAGCAAC
AATTCGGAAG AAGAACCTGT TTTAAGTTTT TCGTGGGCGG GTAAAGATAA TCTTTACAGG
TCGGCTTTTT TTAATTTAAA AACGAATGAG TTAAAGGTTT TGGAAAAAGA CATTTCCGGC
GGTACTTTTT TCCCTGTTGT AAAGCAAAAA AAAGATACTA AAGAATATGA AATTATCTAT
GCCGGAGTTT TTACAAAATA CAACTCGCTT TATAAAATAG ATTCTTCACT TTTTACTGAA
AGGAAGGCAT CTTTAAAACC GCTCGATATT TCGGCTCAAG AAATAAAAAC AAAAATTCCT
AATACAGATA TTTTAACAAA GGATAAGTAT AATTATTTTT CATGGATACA TAAACCCTTT
CCCCTGCCCA TCATTGATTT TTCGGGACTT TTAGGAGAAA ACAAAACCGT ACCGATCGGT
CTAAAATTAT ATTGGAATGA TCCTACAAAT CTTTTATATT TTGAAACTCT TTCTGTTTTT
TATTTTAAGC CTTTTTTTTA TGAAACGTCC ATTTTACTCA AAGCAGCAAC AAGGCCTGCC
GATATCCGGA TTAAATTTTA TGATGAAAAT AAATCCTTTA AATATAGAAA AATCGGAAGC
AGCATAGAAA GCGAATTGCT CTTACCCTTA AATTCTTTTT ATCATAATGT TTCGGGAAAA
GCCGGTTTAT CTATTGAAGG CTTCAGCTTT TTCGGCTCAT CCTACAAAAG AGCAAAAACT
CTTTACGAAC AAAAATTAGG GAACCCCGTC CTATCCGAAG AATTATCCGC CGTTTATACT
TATCAAAAAT CTTCTCAAAA GTTAAACACG AATTTTTTTA CAAAAGATTT TATAATGCTT
CAAGCGGCAG CCGGATTAAA ACACGGCGTC CATTTTCCTT CAAAAACAAA TGCTCTTGCC
GTTCAAGCTT ACGCAGCTTT TAGACCTCCG ATAATTCCGA TTAAATTAAA CTTAAGCTCA
TATTTCGGGT ACAATGCCTT TGCTCTTCCG CACACCGGCA GCTACGGATT TTTTAACAGC
ACGGCTTTGA TGGGTATGGC ATCTTATCTT CCCAATATGA GCGAATATGA AAACGTAAAA
AAACTTATCC GTCCGGGAAA ATTAAATTAC GGCTTCGGCT TTGAGGGAGA GGTCAATCTT
TTAAGTTATG ATATTCAAAC AGGAAGTTCA TGGCTTCCCA TATTTTTTAA CAGGCTCAAT
ATTACAACAG GCTACAGAGC AATCTTTAAC TTTTTAGACG CAGGAAAAAA CACGGCCGAT
ATTTATCAGT CGGTTTACGG CAAACTTTAT ATGACCATAA GCACAGCCGC AAATATCGGT
ATGGAATACG CTCATCCTCT TGAAAAAGTA AAGATAGGAA AATTTAAAGC TATTATACAA
ATAAAATTCT AG
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| Protein sequence | MQNMQCKIKF VFFISFLTCA FIQLNAQNLF VQKTKYFDII YSPVSEKTAA LISEHADNYA
EEISQKLNRK IPKRMPIYIE GGKEALNGYY TFFPYRRIVL FDTLPEEGQL SNLSDIILKV
LYHELTHAIS LTYFLPLLPM SFTEGVAVSY ESAEDDQGRL NDPLIMHHLM QGRLENASPS
WKQAAGARDV YPGGLWPYIY GGAFAQYLQK IYGMETYVKY WANPLSSFPQ GKTKKIFDKE
LDKLWNNFLE SIYFPEKALS PQNPIKEAGG FSLIASSKDG FACFDFTTKN VIFFDDSGKE
EKLFTANPTL SFLSFSQDGK FLLVSDLVNT PHGEHNRATI FDMQKKKFLS KEFLSLRYAS
FCGEALCGIE IKGQFSELVL IDQESFEKKE GLSKTGLLKA GPGLPYSAIY NPVFAGKNKI
ALIAANGINR DILILDTASK KIQKLEFENH LPAIRYLQSN NSEEEPVLSF SWAGKDNLYR
SAFFNLKTNE LKVLEKDISG GTFFPVVKQK KDTKEYEIIY AGVFTKYNSL YKIDSSLFTE
RKASLKPLDI SAQEIKTKIP NTDILTKDKY NYFSWIHKPF PLPIIDFSGL LGENKTVPIG
LKLYWNDPTN LLYFETLSVF YFKPFFYETS ILLKAATRPA DIRIKFYDEN KSFKYRKIGS
SIESELLLPL NSFYHNVSGK AGLSIEGFSF FGSSYKRAKT LYEQKLGNPV LSEELSAVYT
YQKSSQKLNT NFFTKDFIML QAAAGLKHGV HFPSKTNALA VQAYAAFRPP IIPIKLNLSS
YFGYNAFALP HTGSYGFFNS TALMGMASYL PNMSEYENVK KLIRPGKLNY GFGFEGEVNL
LSYDIQTGSS WLPIFFNRLN ITTGYRAIFN FLDAGKNTAD IYQSVYGKLY MTISTAANIG
MEYAHPLEKV KIGKFKAIIQ IKF
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