Gene TDE1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1986 
Symbol 
ID2740439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2000373 
End bp2002283 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content42% 
IMG OID637160876 
Productadenylate cyclase, putative 
Protein accessionNP_972589 
Protein GI42527491 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.55851e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA ATGAGGGTGT AAACGAGAAG GTCAAATTCT CAATCGGTGC TAAACTGATA 
ACTATTATTT CGATTTTGGT TGTGTTTTCT CTGGGTACTA TAACAGGCCT TGTTACATGG
TTTGTAGGTG AAGATATTCA AACTATGTCT GAAGAAAGCA ACAGGACTGT AAATTTTCAA
GCCGGAGCTG CAGCAGAAAA GGAACTTTTG TCGATAAAGG CCAATGCTTT TTTGTTTTTG
GATGTTCTTA ACTCGACCGA AACAGGGTCA GGCATAGCAA AGCAGACTGC CGATTTTTAT
TTTGAAAGAA ACCCTCAGGT AGCGGCTGTT TTGGTTACCG ATGCAAGAAT GAATAAGCGT
ATTTATCGAA AACTCGTTAG TACCAACTTT TTCCTTTCCC GTGAATTGGA TTATTCCGCC
ATCGACGAAT TTATCGAAAA CGAAATGGAT ACGGCTATTC AGGCGGAAAA AGGCATCGAG
CAGGTTATAA ATGCTTCTCC GTTTTTTGGA GAGCCCATCC TTGTTCTTTT TTACCCATAT
AGGGAAAAGG GCTTGGATCA GGGGTTGGTA ATCTTCTTTT CGGCCGAGAC CCTATCCGAA
AATATAGGTA CGGGGAAACT TCAAACAACC TATCTTGTAA ATAACTTAGG TGATATTTTA
ATTCATCCCG ATTTTGAGCT TACCAAAAAC GGAATAAACA TAAGCGATTC AAAACTTTTT
ATAGAAATGC GCGAAAAAGG CGACATGAAC AGGCAAATCC TTTTTACCGA CAAGGAAGGG
AAAAAACAGT TCGGTGCATA CAGAAAAATT TCGATAGCTG ATCTTGCAGT TCTTACCACA
GCCGAGGCCG ATAAGGTTTT GGAACCCGTA GTCAGGTCAA CCTTTAAGAA TGTTACTTTA
GGCATTGCAG TTTTGGCTCT TGCGGTCTTG TTTATCTGGT TTTTCTCCAA ATCGATCAGT
TCTCCGGTTA AGGCTCTTGC CTCGGCTGCC GGAGAAATAG AGCAGGGCAA TTATGAGCTT
GATCTAAAGG CTAAGACAAA GGATGAAATA GGCCTTTTAA CGAACAGCTT TGTAAGAATG
GGTAAGGGCT TGGCTGAAAG AGAAAGACTC AAGGATTCGT TCGGCCGCTT TATAAACAAG
GAAATTGCAG AGCTTGCTAT GAAGGGTGAG CTTGCACTGG GAGGCGAAAC AAAGGAAACA
ACCATTTTCT TCTCGGATAT ACGCTCCTTT ACGGCAATTT CTGAAAAACT TGAACCGAAT
GAGGTTGTAG AATTCCTCAA CGAATACATG ACACAGATGG TAGAGTGCGT AAACGATACC
CATGGTGTAG TAGATAAATT TATAGGCGAT GCCGTTATGG CTGTTTGGGG TGCTCCTACA
AGTGCGGGAA ATCCGAGAGA GGATGCTCTT AACTGTATAA GGGCTGCTTT AAGGATGAGA
GCCGCCTTAA TTATCTTCAA TCAAGGAAGA GGAGGCGACA AAAAGCCCAT AATCCGCATA
GGCTGCGGTA TTAACTCTGG CCCTGTAGTT GCAGGTCAGA TAGGTTCCAA AAAGAGGATG
GAGTACACGG TAATAGGCGA TGCCGTAAAC TTGGCCTCCC GAACCGAAGC TTTAAATAAG
CCTCTCGGAA CGGATATTCT TATTACCGAA AACACTTATC GGCTTGTAAA AGATAAGGTC
TTGGTTGAAG AAATGCCCTC GGTTACGGTT AAAGGAAAAT CAGCTCCTTT AAGAATGTTT
GCGGTTATAA ATATGCCTGA AGAAACTGAC ATTCCCGGAG CCGGAGAAAA GGGCCCGAAG
ACTTTGGCGC AAATTAGAGC AAAATTAGGA ATTCCTACTC CCAATTTGAA TAAGGTAGAT
GTAAATGAAG ACGAAAAGAA ATACAACATT CAAGCCCAAA ACAAACAGTA A
 
Protein sequence
MLKNEGVNEK VKFSIGAKLI TIISILVVFS LGTITGLVTW FVGEDIQTMS EESNRTVNFQ 
AGAAAEKELL SIKANAFLFL DVLNSTETGS GIAKQTADFY FERNPQVAAV LVTDARMNKR
IYRKLVSTNF FLSRELDYSA IDEFIENEMD TAIQAEKGIE QVINASPFFG EPILVLFYPY
REKGLDQGLV IFFSAETLSE NIGTGKLQTT YLVNNLGDIL IHPDFELTKN GINISDSKLF
IEMREKGDMN RQILFTDKEG KKQFGAYRKI SIADLAVLTT AEADKVLEPV VRSTFKNVTL
GIAVLALAVL FIWFFSKSIS SPVKALASAA GEIEQGNYEL DLKAKTKDEI GLLTNSFVRM
GKGLAERERL KDSFGRFINK EIAELAMKGE LALGGETKET TIFFSDIRSF TAISEKLEPN
EVVEFLNEYM TQMVECVNDT HGVVDKFIGD AVMAVWGAPT SAGNPREDAL NCIRAALRMR
AALIIFNQGR GGDKKPIIRI GCGINSGPVV AGQIGSKKRM EYTVIGDAVN LASRTEALNK
PLGTDILITE NTYRLVKDKV LVEEMPSVTV KGKSAPLRMF AVINMPEETD IPGAGEKGPK
TLAQIRAKLG IPTPNLNKVD VNEDEKKYNI QAQNKQ