Gene TDE1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1953 
Symbol 
ID2741516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1969120 
End bp1969761 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content39% 
IMG OID637160843 
ProductTetR family transcriptional regulator 
Protein accessionNP_972556 
Protein GI42527458 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.957288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCT GCAAGCGTAC GGCAGATACA AAAGATCTGA TACTTAAAAG TGCAAAAAAA 
TATTTTCTTG AATACGGCTA TCAGGCGGCT CCTCTTAGGA AGATTGTATC GGAAGCAGGA 
TTTACGCCCG GAGCATTATA CGGCTATTTC AACTCAAAAG AAGAGCTTTT TTATGCAATT 
ACCGATCCGG TAGCAAATAA GTTGATGGAG GTACTTGACC GTATCCGAAG CGAAATGGAT 
GCTTTGCCCA AAAAAGAACG GCTTTACGGT ATGGGCAAGG TCTACTACCC GAATATTCCT 
AAAATCGTTG ATATTTTGAT TGCGGATAGA GATGCCGTAA AACTCATTGT AAACGGGGCA 
AAGGGGACAA AGTACGAGAA TTTTCTTGAT ACCATAGCCG GACGAAACGC TTTGACTATC 
AGTAAAACCG TAAAAAATAT TGAAGAAAAA AACATTTGCC CTATTAAAGA ACAGACGATA 
GAAGTTTTGA TGGAAGGTTA TATTGCAACA CTGTTTAGGC TCATCATTTC GGACAAGGAC 
AGGGAAACAA TTATCCGGTG TATGGAAATG ATAGGAAAAA TATATGAAAC GGGAATTATC 
GCACTTATAC AAAAGGAATG GGGGAATGAA AATGACATCT GA
 
Protein sequence
MEACKRTADT KDLILKSAKK YFLEYGYQAA PLRKIVSEAG FTPGALYGYF NSKEELFYAI 
TDPVANKLME VLDRIRSEMD ALPKKERLYG MGKVYYPNIP KIVDILIADR DAVKLIVNGA 
KGTKYENFLD TIAGRNALTI SKTVKNIEEK NICPIKEQTI EVLMEGYIAT LFRLIISDKD 
RETIIRCMEM IGKIYETGII ALIQKEWGNE NDI