Gene TDE1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1919 
Symbol 
ID2740417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1938409 
End bp1939980 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content37% 
IMG OID637160805 
Producthypothetical protein 
Protein accessionNP_972522 
Protein GI42527424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00679545 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTT TTGCTGTTTT ATCCGCCTAT GATATTTCGG AATATTCGTT TAAAAAACTC 
GAAAACGGTA TAATCCCATT TGAAGCCTCT TTCCGTGCGG CTGCCGCATT TCCCGATTGT
AAAAAGGTTG TTATTTTAAC CTCTGCTTCA TGTGAAGCCC CTATCGTTTC CATATTAAAA
AATATAAAAT CTGACGAGCT GAAAATAGAG TGGAAGGTTA AGGTTTTGGA AAAAATAAGT
CCTCAAGCCG TATTTGAAGA AGCTGCAAAA GAAGCCGAAG CGGAATCTTC CGGCTTTGAA
AATGTTTTCT TTTTGCATGG GGATGAGCCT TTTATCGATT TAAATGCAAC GGAAAAACTT
TTTAAGCAGC ATTTGGAATA CAGAGCAGAA TACAGTTTTG CCGACGGATA CCCTGAGGGC
CTTATCCCTG AAATTCTTAC CTCAGGTCTT TGTCCTATTC TTGCAAAGCT TTCAGAAAAC
GAAACTTCTT TTGAGCGTTC TTTTATTTTC GATACGATAA AAAAAGAAAT AAACAGCTAT
GATATCGAAA CTATGATAGC CCCCTTCGAT TTAAGGCATC TAAGGCTCCG CTTTGCAGCC
GACTCAAAAC GGAATGCTCT TTTATGCAGC CGCTTTACAG GCATAAATGC TGAAAATTAT
GCAGAATTGA TTGAAGAAAA AAAGGCAGAA CTTTTTACTC TTCCTGCATA TTACGGTATC
GAGATAAATT CTTCCTATCC TTTAAAGTCG ATATATAAGC CTAATGAGGT TTTAGGACTT
ACAGAAAAAA AAGAAATGGA TAAGGCTGCT CTTTTTTCTC TTATCGAAAA AATTGCGGAA
TATTCGGATG ATGCCGTAAT TTCTCTTTCG GTTTTTGGTG AGCCTTCAAT GTATCAGGAT
TGCCTTTCGG TAATCGAAAA AATTTTGTCG TTTCCGAAGT TATCCGTTTT GATTGAAACT
TGCGGTTTAT ATTGGCCTTC ATCATTTATA GAACGAGTTG AAAAAGTTAT TGCGTCAGCT
CCCGAAAGAA AAAACAAGAT GCTTCCGGTT TATTGGATTG TATGTATTGA TGCGGTCAGT
TCAGGAATGT ATGCTAAGGT GCACGGTCTT TCCGAAGATG AGGCAAACAT TAAATTAAAA
CAAGCTCTTA CTTTTACCGA CAGTTTAAAA AAAGTTTTTC CCGATGCCGT ATGGGCTCAA
ATTATGCGCA TAAAAGAAAA CGAGATAGAG GTTGAGCCCT TTTACCGTTT TTGGAAAAAT
TTGGGTGTTA ATGTAATTAT TCAAAAATAC GATACCTTTT GTAAATTGCT TGAAGATAAA
AGAGTTGCAG ACTTATCGCC TTTTAATAGA CATCCATGCT GGCATTTAAA AAGGGATATG
TATATTTTGG CTGACGGCTC GGTGCCTCTT TGCAAAGAAG ATGTTAAAAG AAATAATATT
TTAGGAAATG CTTTTTCGGA CAGCTTAGAC TCAATCCGTA AAAAAGCATT CGAGGCATAT
AAGAAGCATT TGGAATGCAA ATACGGAGAT TTGTGCGGAG CCTGCGATGA ATACTATACC
TACAATTTTT AA
 
Protein sequence
MKSFAVLSAY DISEYSFKKL ENGIIPFEAS FRAAAAFPDC KKVVILTSAS CEAPIVSILK 
NIKSDELKIE WKVKVLEKIS PQAVFEEAAK EAEAESSGFE NVFFLHGDEP FIDLNATEKL
FKQHLEYRAE YSFADGYPEG LIPEILTSGL CPILAKLSEN ETSFERSFIF DTIKKEINSY
DIETMIAPFD LRHLRLRFAA DSKRNALLCS RFTGINAENY AELIEEKKAE LFTLPAYYGI
EINSSYPLKS IYKPNEVLGL TEKKEMDKAA LFSLIEKIAE YSDDAVISLS VFGEPSMYQD
CLSVIEKILS FPKLSVLIET CGLYWPSSFI ERVEKVIASA PERKNKMLPV YWIVCIDAVS
SGMYAKVHGL SEDEANIKLK QALTFTDSLK KVFPDAVWAQ IMRIKENEIE VEPFYRFWKN
LGVNVIIQKY DTFCKLLEDK RVADLSPFNR HPCWHLKRDM YILADGSVPL CKEDVKRNNI
LGNAFSDSLD SIRKKAFEAY KKHLECKYGD LCGACDEYYT YNF