Gene TDE1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1915 
Symbol 
ID2740413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1932018 
End bp1933193 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content44% 
IMG OID637160801 
Productalcohol dehydrogenase, iron-containing 
Protein accessionNP_972518 
Protein GI42527420 
COG category[C] Energy production and conversion 
COG ID[COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00162384 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAATT TTGAATTTGA AGTGCCGGTT AAAATTTTAT TCGGTAAGGG CAGTATTGAG 
AACCTCGTAC CTGAGATTCT CAAATACGGA AAAAGAGTTC TCCTATGTTA CGGCGGTGGA
AGTATTAAAA GAATGGGGCT TTATGATACA ATCATTAAAA AACTGGATCA AGCCGGAATC
TTTTATAAGG AACTTTCCGG TATTTCGCCC AATCCCCGCA TTGAAGAAGT TGAAGAGGGA
ATAAAGATAG TCCGTGAACA CAAGCTGGAT TTTATTCTAC CCGTCGGAGG GGGAAGCACC
ATCGATTGCT CGAAGGCTGT TTCTGCCGGT GTAAATTATG CAGGAAGCGC ATGGGATTTG
ATTACGGGCA AGGCCGAAAT TAAAAATGTA CTTCCGATAG GAACGGTACT GACTCTTTCT
GCTACCGGTT CCGAGATGAA CTGCGGAGCC GTTATTTCAA ACCTTAAAAC GAAGGAAAAG
CTGGGCTTCG GAGCTCCGCC CCTTCTTCCG AAATTTTCGG TTCTTGATCC CGAATACACC
TATTCCGTTC CTAAAAATCA GACAGCCGCA GGTACGGCCG ATATTATGAG CCACACCTTC
GAATGCTATT TTAGCCTAAA TGACGGGGCC TATCTTCAAG ACAGGTTTGC AGAAAGTATC
TTAAAAACCT GTATCGAATA CGGACCCTTG GCTATTAAAA ATCCCGAAAG CTACGAAGCC
CGCTCCAACC TTATGTGGGC AGGTACATGG GCTATAAACG GCCTTTTAAG CGACGGTAAA
AAAACGGCTT GGTCTGTTCA TCCTATGGAG CATGAGCTGA GTGCTTTTTA TGACATCACT
CACGGAGTGG GGCTTGCTAT TTTAACTCCT CATTGGCTGA GGCATTGCTT AAACGATAAA
ACCGTTAAAA AGATTGCAGA TTACGGTGTA AATGTTTGGG GCCTTCCAAA AGGAGAAGAA
GTTTATAAAA CTGCCGAAAA GGCAATCGAG TGTACTTCGG ACTTTTTTAA ATCTCTTGGC
ATTCCGATGA CCCTGAAGGA AGCGGGAATA GGCGAGGAGC ATTTAAAAGA AATGGCTGAA
GCCGCTGTTG CTCACAGAGG TAAAAACGGA GTTATCTACG GCTTTCAAGA ACTTCGAGCC
GATGATGTTT ATGCAATATA TAAGGCTGCT CTTTAA
 
Protein sequence
MYNFEFEVPV KILFGKGSIE NLVPEILKYG KRVLLCYGGG SIKRMGLYDT IIKKLDQAGI 
FYKELSGISP NPRIEEVEEG IKIVREHKLD FILPVGGGST IDCSKAVSAG VNYAGSAWDL
ITGKAEIKNV LPIGTVLTLS ATGSEMNCGA VISNLKTKEK LGFGAPPLLP KFSVLDPEYT
YSVPKNQTAA GTADIMSHTF ECYFSLNDGA YLQDRFAESI LKTCIEYGPL AIKNPESYEA
RSNLMWAGTW AINGLLSDGK KTAWSVHPME HELSAFYDIT HGVGLAILTP HWLRHCLNDK
TVKKIADYGV NVWGLPKGEE VYKTAEKAIE CTSDFFKSLG IPMTLKEAGI GEEHLKEMAE
AAVAHRGKNG VIYGFQELRA DDVYAIYKAA L