Gene TDE1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1871 
Symbol 
ID2740060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1893752 
End bp1894612 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content18% 
IMG OID637160758 
Producthypothetical protein 
Protein accessionNP_972475 
Protein GI42527377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000201815 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AAATAATGAA AGATCTATGT ATTCTTTTTA TATTGTATAT TCTTGTTTTT 
TTTATGCTTT CTTATGTCGG TAAATTCCTT TTTAAAAATT TTTATAATTA CTATTATATT
TTATTTGTTA AATATAATGG AATTTTTGGT AGTTTATTAT TTTTACTGTT TATAATCATT
TTCTATTTAT TTTATTCAAA AGATTTAAAG ATAATATTTA TTTATAAAAA ATTAAATTTC
TCTTTTATTG TAAAAATTTT GATTTATATA TTATCAACCA GAATGATCTA TTACATAATA
TACTTTATCT TTGATAATGC TTTTCTTTTT AATTTTTTTA AATATTTTAA TGATGTTTTA
ACGGGTAAAA AAAATATTAC TATATATGAT ATTTTGATTT TAGAAAAATC TCTAAAACCT
CGTTTTGAAC CTTTTATGCT TATAGGTTCA GTAATTTTTG GTCCTATTTT TGAAGAAATA
CTATATAGAG GGCTTATGTA TAATAAATTA AAAGAAATAA GTAATGCCTT TATTGGTGTA
CTTATTTCTT CAATACTTTT TGCTCTTTTA CACATACCAA AATACGGTTT TGGAATAAAT
ACATTCTTTT TATTTTTAGT AGGAATTTTA TTGACTTATT GTTATGAAAA AACCAATAAT
ATTTATATTC CTATTCTTGT TCATTCAATT AGTAATTTTT TTATTTTTTT ATTTAATTAT
GTATATTTTT ATTTTTTAAT AGTTATTTAT TTTATAATTT TTATTGCCGG TATAATAATA
GCTATACAAG AAATAAAAAA ACACCTAAAA GTGCGAAAAA CTTTTAATTT TGTACAATCA
GATTTTCCAT CTCAAGATTG A
 
Protein sequence
MNKKIMKDLC ILFILYILVF FMLSYVGKFL FKNFYNYYYI LFVKYNGIFG SLLFLLFIII 
FYLFYSKDLK IIFIYKKLNF SFIVKILIYI LSTRMIYYII YFIFDNAFLF NFFKYFNDVL
TGKKNITIYD ILILEKSLKP RFEPFMLIGS VIFGPIFEEI LYRGLMYNKL KEISNAFIGV
LISSILFALL HIPKYGFGIN TFFLFLVGIL LTYCYEKTNN IYIPILVHSI SNFFIFLFNY
VYFYFLIVIY FIIFIAGIII AIQEIKKHLK VRKTFNFVQS DFPSQD