Gene TDE1864 details

Gene Information

• Locus tag: TDE1864
• Symbol: ruvC
• ID: 2740053
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1888662
• End bp: 1889198
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637160751
• Product: crossover junction endodeoxyribonuclease RuvC
• Protein accession: NP_972468
• Protein GI: 42527370
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000897484
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTATTT TAAAAGCAGC TTCAAGCAAA AAAAATCTCC GCCCCTGTGT TATAGGGATT 
GATCCGGGTT TGGCAAATAC GGGATATGGA ATTATAAGTT TTTCAAATAA CCGCTTTGAG 
TGTATAGAAT ACGGCTCAAT AAGTACCGAG CCTCATTTAC TCCAAGGGGA AAGGCTTTTA 
AAAATTTTCG ATAAGGTTTC GGAACTTATT GAAAAATACA GGCCTAAGGA GGCCGGAATA 
GAAACCTTAT ATTTTGCAAA AAATGCGACG AGTGCAATGT CCGTTTCGGA AGCCCGCGGC 
GTGGTTCTTT TGGCTCTGGC TCAAGGGGGG GTAAGGGTAG GAGAGTATGC TCCCAATTCC 
ATTAAAAAAG CTGTAACGGG TATTGCTCAA GCTGAAAAAA GGCAGGTACA GGAAGCCGTA 
AAATTGATTT TAGGTTTAAA GGAAATTCCT AGGCCTGACC ATGCGGCCGA TGCCTTGGCT 
GCTGCCATTA CAAAAATAAA TTTAGGAGAT GTAGGGGAGG TACGGGCTTA TGTTTAA 

 

Protein sequence

MGILKAASSK KNLRPCVIGI DPGLANTGYG IISFSNNRFE CIEYGSISTE PHLLQGERLL 
KIFDKVSELI EKYRPKEAGI ETLYFAKNAT SAMSVSEARG VVLLALAQGG VRVGEYAPNS 
IKKAVTGIAQ AEKRQVQEAV KLILGLKEIP RPDHAADALA AAITKINLGD VGEVRAYV