Gene TDE1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1858 
Symbol 
ID2740047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1884772 
End bp1885086 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content41% 
IMG OID637160745 
ProductPadR family transcriptional regulator 
Protein accessionNP_972462 
Protein GI42527364 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000789415 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTT CGATAAATAC GGGCTTGCTT GAAGCCTGCG TTCTAGCCCT TTTAAAAGAC 
TCGGATTCTT ACGGCTACAA ATTAACGCAG GATGTCAAAA GCCTTCTTCC AATATCGGAA
TCTACCTTAT ACCCTGTTCT AAAAAGACTG CAAACAAGCG GATATTTGGA AACCTACGAC
CAGCCTATCG ACGGACGAAA CCGTAAGTAC TACAAAATAA CGCCTGCGGG ATTAAGGCAG
CATGAACTTT ACATTGGAGA ATGGAAGTCC TATAAGGAAC TAATAGACAA GATTTTTAAG
GGAACAGCCC TTTAG
 
Protein sequence
MIFSINTGLL EACVLALLKD SDSYGYKLTQ DVKSLLPISE STLYPVLKRL QTSGYLETYD 
QPIDGRNRKY YKITPAGLRQ HELYIGEWKS YKELIDKIFK GTAL