Gene TDE1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1857 
Symbol 
ID2740046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1884019 
End bp1884540 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content39% 
IMG OID637160744 
Producthypothetical protein 
Protein accessionNP_972461 
Protein GI42527363 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000332835 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAATTTTGAT TACTTTATTT TTTATGTGTA TTTTGGCTAT GGGCTTTTCC 
GAAGATCCGG CTACCGGTTT ATGGAAAAGC GTGGACGAAA AAACCAATGA GGTTACCGGC
GTCTGGAACA TTTATGAAAA AGACGGAAAA TTGTTTGGAG AAATGCTTGT TACAGTAGGT
CATGATCCTA AGGAGCTTGC GTCTTCCTGT AAAGAATCCT ATAAAGATTT TCCGAAAGCC
GGAAAGGTAA ATGAAATGCC GCTTGTAGGC ACGCCTTTTA TTTACGGTCT TGTAAAAAAA
GAAACCGGTT CATGGCATAA GGGTTATATC ATTGATCCGG GTGACGGCAA GTATTACTAT
TGCAAAATAA AATTTCACAA GGCTGACGGT AAAAAATTTA AAACCGATAC CCTTGAAATG
CGCGGAGAAA TCGGTCTCGG CATAGGACGC AGTCAGTATT GGCTTAGAAC CGACAAGGCA
GAAACCGATG AATTGATCAA AAACAATGTA GTTAAGAATT AG
 
Protein sequence
MKKIILITLF FMCILAMGFS EDPATGLWKS VDEKTNEVTG VWNIYEKDGK LFGEMLVTVG 
HDPKELASSC KESYKDFPKA GKVNEMPLVG TPFIYGLVKK ETGSWHKGYI IDPGDGKYYY
CKIKFHKADG KKFKTDTLEM RGEIGLGIGR SQYWLRTDKA ETDELIKNNV VKN