Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1717 |
Symbol | |
ID | 2740889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1771571 |
End bp | 1772221 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160600 |
Product | hypothetical protein |
Protein accession | NP_972321 |
Protein GI | 42527223 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000535266 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TTATTTTTGT TTTTTTATTG GTTGCATTGC TTGCAACACC TTTGGCTGCA CTTGATTTCA GTGCAGGTGG CGATTTTAGC TTTGCTCATA TGTTGAACAT AGTTAAAGTT GAAGATGTAA AAGGAACTAC TTCTGTGAAT TTTTTAGGTG TTAACGGTTT CTTTGATGCC GAATACGTAA GAGCAGGCTT AGGAGTAAAT TTCCTCGTCG GCGGAATAAC GGCAAAACTT GAAAATGCCG GTCCTCTTTC AGGAACAACT AAAGATAATA AGACATCTTT AATAAACCTC CGCCTTTCGG TTTTGGGAAA ATATCCCTTT ACCATTGCTA AGATTGTAAA GCTATACCCC TTAGCCGGTA TGGAAGTGGA TTTCAATGTT TCAGCTAAGT ATGACGGTAA GAATGCAAAG GAGCATCTGT CTGATGATGA AAAAAAAGAC TTAAATCATT ACTACCTAGT TTTAGGTGTA GGAGCCGATA TCACTGTTAC AGGCAATCTC TTTGTAACAC CCAAAGCAAC TTTCGGTTTT GATTTGAGAC AGAACTCGAC TGCAAAAGCA GCAAAGAAAG CCGGTGCAAA CATAAAAGGC GGTCATCAAA TGAAAATAGA GTTCGGTCTA GGCGTAGGCT ACAAGTTCTA A
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Protein sequence | MKKLIFVFLL VALLATPLAA LDFSAGGDFS FAHMLNIVKV EDVKGTTSVN FLGVNGFFDA EYVRAGLGVN FLVGGITAKL ENAGPLSGTT KDNKTSLINL RLSVLGKYPF TIAKIVKLYP LAGMEVDFNV SAKYDGKNAK EHLSDDEKKD LNHYYLVLGV GADITVTGNL FVTPKATFGF DLRQNSTAKA AKKAGANIKG GHQMKIEFGL GVGYKF
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