Gene TDE1675 details

Gene Information

• Locus tag: TDE1675
• Symbol: rplI
• ID: 2740130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1728733
• End bp: 1729332
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637160559
• Product: 50S ribosomal protein L9
• Protein accession: NP_972280
• Protein GI: 42527182
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0359] Ribosomal protein L9
• TIGRFAM ID: [TIGR00158] ribosomal protein L9

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000107335
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTAA TTTTAAATGA AGATGTTAAG TATCTCGGAG AAGAAGGCGA TATTAAGAAC 
GTAGCTAAGG GATATGCCCG AAACTACCTT TTCCCCAGAA ACTTAGCTGT TCCTTGTAAT 
GAGTTTACTC TGGCTCATTT TGAATCACGT AAAGAAGAAA TTGAAGCTAA AAAGGCTGCA 
AAACGCCAAG ATGCTGCAGG GCTTAAAGAA AAACTTGAGG CTCTTTCAAT TAAGATTCTT 
ATGCCTGCAG GACCTAACGG AAAACTCTAT GGTGCCGTTA CAACTCAAAC TCTTTTTGAT 
GAACTGCAAA AACTTAATTT CGATATTGAA AGAAAACGTA TCGAAATCCT CGGTCAGACA 
GTTAAGAGCA CAGGTGTACA TAAGGCCATT GTAAAGCTTT ATGAAAATAC CTCTGCAGAG 
ATTTCTTTTA CCGTTGAGGC TCAGATTGCT GAAGAAAAGC CCGTTAAGGC TTCCGAGAAA 
AAAGGACGAA GACCTCGCAG GGATGAAGAA GCTTCTGATG AACAAATTTT AGCAGAAGAA 
AATTCCGTTA CTGAAGAAGC CGTTTCTGAA GAAATTCAAA ATTCGGAATC GGAAAACTAA 

 

Protein sequence

MKVILNEDVK YLGEEGDIKN VAKGYARNYL FPRNLAVPCN EFTLAHFESR KEEIEAKKAA 
KRQDAAGLKE KLEALSIKIL MPAGPNGKLY GAVTTQTLFD ELQKLNFDIE RKRIEILGQT 
VKSTGVHKAI VKLYENTSAE ISFTVEAQIA EEKPVKASEK KGRRPRRDEE ASDEQILAEE 
NSVTEEAVSE EIQNSESEN