Gene TDE1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1664 
Symbol 
ID2739005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1718002 
End bp1719042 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content40% 
IMG OID637160546 
Producthypothetical protein 
Protein accessionNP_972269 
Protein GI42527171 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000631476 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAA AAATTTTTTT TGTAGCCGTA TGTTCACTTT TAGTGGTTTC GGCTTGGGCA 
CAGGCTCCTT CGATTGTTGG AACAGACTAT GTCCGCCCCG CAATTCACTA TGTTGAAGAA
GGCACCAACT ATGTAAACAG TGATGTCTTT TTTAAACTAA GATCAACCGA TAAAGAAACC
GGTCTTGACT TTGTAGAATT TGCCTTGAAT GGTGCAGATT TTATGAGATA CAAAAACCCC
TTCCAACTTC TTGAAGAAGG AAAATATGAT ATTTCATACA GAGGATTTGA TAACAGCGGA
AATCTGGAAT TGCCCAAAAC TTTGTCGGTA ATCGTAGATA ATACAGCTCC TGATACAATG
ATCAAGACAA CAGCACCTTT GTACAATGAC GGTGTCGTAG TTTATTGCTC AGCCGATACA
AAATGGTATG TTTCTGCAGC CGACATAGTC GGAGGATCAG GTGTAGCAGC CGGTTACATG
GGAACGGATC TTAACTCTCT TAAAATATCC GGAAACGGAA AAGAGTCTGA ACAGACCTAT
GTTTCCTTAG ATGGTGAAGG ACCTGTAAAC CTTTATTACA CAGCTATTGA CAATGTAGGA
AACCTTGCTC CTATTAAGTT ACTCGCAGTT ACTATCGACA GGACAGCTCC CGTCGTAAGC
ATTGCAAATT CAAACCGTCT TATCAACAAG GATGAGGAGT ACATGGTATT CCCCAGCGAT
AGAGTTGTAG ATGAAGAAGG CAGAGTTATT GTTTCTACAA GTGAAACCGT TTCATTTGCA
GCAAAAGACG ATCTTTCAGG CGTTGATGCA ATTTATGTAA AAGTAAATGA CGGAGAATAT
ACCAAGTATG TAGAACCGAT CAGATTTACG CAAAATGCAG TTTACAAAAT CGAAGTTAAA
GCTATCGATA ATGTAGGCAA TGTTTCTGAG CCTGTTATGT ACACATTCTA TGTAGATCAG
ATTACACCTA ATTCGGAGGT TGATATAATC GACAGGTCAG GGAATCTTCT CCCGGCCACA
ACCCCCGCAA ATGCCCAGTA A
 
Protein sequence
MIKKIFFVAV CSLLVVSAWA QAPSIVGTDY VRPAIHYVEE GTNYVNSDVF FKLRSTDKET 
GLDFVEFALN GADFMRYKNP FQLLEEGKYD ISYRGFDNSG NLELPKTLSV IVDNTAPDTM
IKTTAPLYND GVVVYCSADT KWYVSAADIV GGSGVAAGYM GTDLNSLKIS GNGKESEQTY
VSLDGEGPVN LYYTAIDNVG NLAPIKLLAV TIDRTAPVVS IANSNRLINK DEEYMVFPSD
RVVDEEGRVI VSTSETVSFA AKDDLSGVDA IYVKVNDGEY TKYVEPIRFT QNAVYKIEVK
AIDNVGNVSE PVMYTFYVDQ ITPNSEVDII DRSGNLLPAT TPANAQ