Gene TDE1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1616 
SymbolhprA 
ID2740857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1663845 
End bp1664813 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content39% 
IMG OID637160498 
Productglycerate dehydrogenase 
Protein accessionNP_972222 
Protein GI42527124 
COG category[H] Coenzyme transport and metabolism
[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AATTAAATTT GGTTATTCTT GACGGGTTTA CTTCCAATCC CGGAGACCTT 
TCGTGGGATG AGTTAAAATC GGTTTCAAAT CTTACAATAT ACGATAAAAC AAGTGCAGAG
GAACTTCTTG AAAGGTGTAA GGAGGCTGAT GCCGTTCTTA CCAATAAGGT TGTTTTTTCT
AAAGAAATAA TGGATTCTTT GCCACGTCTT AAATATATAG GAGTTTTAGC TACCGGATAC
AATGTTGTCG ATATTGAGGC TGCAAGAGCT AAAAATATCT GTGTAACGAA TATTCCCTCT
TACAGCACCG ACAGCGTGGC TCAACTTGTA TTTGCCCTTA TTTTTCACTT TTATTGGCAT
GTAAAGGAGC ATAGCGATGA AGTTATGGGC GGAAAATGGT CGGCGTCCCC TCATTTTTGC
TATCATAGCT TTGATATAAG GGAGCTTTCC GATAAGACTA TGGGTATAGT CGGCTTTGGG
AACATAGGCC AAGCCGTTGC AAAAATTGCC CTTGCCATGA ATATGAAGGT AATCTATTTT
AACCGCTCTA AAAAAAATAT TAAGGGCTTA GAAGAAGCAA AACAAGTTTC TTTAGATGAG
CTTTTTTCTT CTTCCGATAT AATAAGCTTA AACTGTCCTT TGACTCCGGA AACAAAAGAA
ATTATAAATG CCGAGTCCTT AAAAAAGATA AAAAAAACTT CCATTGTAAT CAATACGGGA
CGGGGCCCTC TTATAAACGA AAAGGATGCA GCAGAGGCTT TAAAGGAAAA AAGACTTGCA
GGTCTTGCCT GCGATGTTCT CAGTGTAGAA CCTCCGGCTA AGGATAATCC CTTGCTTAAA
GCTCCGAACT GTATTATTAC GCCACACATG GCATGGCAAA CCTTTGAGGC CAGAGAGAGG
CTTATAAAAA CAGCTGCAGC TAACGCAAAA GCCTTTATAG CCGGAAAAGA AATAAACAGG
ATTAATTAG
 
Protein sequence
MSEKLNLVIL DGFTSNPGDL SWDELKSVSN LTIYDKTSAE ELLERCKEAD AVLTNKVVFS 
KEIMDSLPRL KYIGVLATGY NVVDIEAARA KNICVTNIPS YSTDSVAQLV FALIFHFYWH
VKEHSDEVMG GKWSASPHFC YHSFDIRELS DKTMGIVGFG NIGQAVAKIA LAMNMKVIYF
NRSKKNIKGL EEAKQVSLDE LFSSSDIISL NCPLTPETKE IINAESLKKI KKTSIVINTG
RGPLINEKDA AEALKEKRLA GLACDVLSVE PPAKDNPLLK APNCIITPHM AWQTFEARER
LIKTAAANAK AFIAGKEINR IN