Gene TDE1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1609 
Symbol 
ID2740850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1658466 
End bp1659287 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content33% 
IMG OID637160491 
Producthypothetical protein 
Protein accessionNP_972215 
Protein GI42527117 
COG category[S] Function unknown 
COG ID[COG3868] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA CAAAATATCT TTACATGGTT TTGATTTTTT TTGCGATCAT TGTAATAAAA 
GGCATGGCAG CAGAAAACAA CAAAGAGTAC AAAGTACTGA TAGGTATGGC CCCAGATAAA
GCGGTAAATC TTAAAGGAAT AAAAACGCTG GTAATTGATG CGGAATTTTT TTCTAAAGAG
GAGATAGCAC AGCTTCACAA AAACGGAAAT GTTAATATAT TTTCTTATTT AAACATCGGC
TCTATCGAAA CATTCCGCGA TGATTATGAA GCATTTAAAT ATCTAGCTTT AGGCGACTAT
GAAAATTGGG ATGAAGAAAA ATGGATAAAT GTTGCGGACA AAAGATGGCA AAAAAGAATT
AAGGACAAAG CACGGCTCTT ATCTCAAAAA GGCATAGACG GTTTTTTTCT TGATAATGCC
GACATCTATT ATCATTATAA AACACCCGAA ATATATCGGG GACTTATGAC CCTTTTACAG
GAAATACATA AAAAAAATAA ACCTATTATA ATCAACGGCG GGGATACTTT TATAAGTCAG
GCAATGAAGG AAAATGCTCT TAAAGGAATC GTAAACGGAA TAAATCAGGA AAGCGTATTT
ACCGAAATAA ATTTTAAGGA TAACACATTT GGAGTAAAAC CCATAGAAGA CAGAGAGTAT
TTTATGGACT ATCTGGATAA ATGTAAAACC TATGGATTTA CCGTCTATTT ACTGGAATAC
GGCCCAAGCA AAAAAATTGA AAAAGATATA AAGGCTTATT GTCAAAGAAA CGGCTTTATT
TACGATATTT CCCATTCATT GCAGCTCTAT AAACCTTTTT AA
 
Protein sequence
MKNTKYLYMV LIFFAIIVIK GMAAENNKEY KVLIGMAPDK AVNLKGIKTL VIDAEFFSKE 
EIAQLHKNGN VNIFSYLNIG SIETFRDDYE AFKYLALGDY ENWDEEKWIN VADKRWQKRI
KDKARLLSQK GIDGFFLDNA DIYYHYKTPE IYRGLMTLLQ EIHKKNKPII INGGDTFISQ
AMKENALKGI VNGINQESVF TEINFKDNTF GVKPIEDREY FMDYLDKCKT YGFTVYLLEY
GPSKKIEKDI KAYCQRNGFI YDISHSLQLY KPF