| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1575 |
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| Symbol | lipA |
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| ID | 2739325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1622043 |
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| End bp | 1622915 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637160457 |
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| Product | lipoyl synthase |
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| Protein accession | NP_972181 |
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| Protein GI | 42527083 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00830336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTA AGGCTGGGTT TATGACTTGT AATCAAAGAA AACCTGATTG GTTAAAAATA
AAACTTCCTA CCGGAGAACT TTCACAGGAA GTATCGAATA CAATAAAAAT ACATAAATTA
AATACTATAT GTACCAGCGG CAAATGTCCC AATCAGGGAG AATGTTGGAG GTGCGGAACT
GCAACATTTA TGATTTGCGG AAATATCTGT ACGCGTGCAT GTAAATTCTG TAATGTGCCT
ACCGGTTGCC CATTGCCCCT AAATCCTAAT GAGCCGATGG AAATAGCTCA ATCGGTTGAG
GCTTTAAAAT TAAAACATGT AGTTTTAACC TCGGTAGATA GGGACGATAT AAAAGATTTC
GGTGCTTCCC ACTGGGTAAA GGTTATAAGA GCCGTAAAAC AAAAAACACC GAATGTTACT
ATGGAAGTTT TAATTCCCGA TTTTCAAGGC CATGAAGATT TGGTATCGAT GATTATCGAA
GCAAAACCTG AGGTAATTTC TCATAATCTT GAAACGGTAC GCAGGCTTTC TCCCCATGTC
AGGAGCAGGG CTACATATGA TACTTCTCTC AAAGTTTTAA AACAAATTGC AGACTCCGGC
TTGGTATGCA AATCAGGTAT TATGTTGGGG CTGGGGGAAA CAAGGGCTGA AATTTTAGAA
ACCATGGACG ATTTACGCAA AATAAACTGC AAAGTTATGA CCATAGGCCA ATACCTCAGG
CCCTCTATAA AAAACATTGA GGTTAAAGAA TATGTAAGGC CTGAAGTCTT TGAAGAATAT
AAACAAATAG GTTTGGAGAA GGGCTTTTCT TTTGTGGAAA GCGGTCCCCT TGTTCGTTCC
AGTTATCATG CCGAAAAGCA TGTGTTGAGC TAA
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| Protein sequence | MNFKAGFMTC NQRKPDWLKI KLPTGELSQE VSNTIKIHKL NTICTSGKCP NQGECWRCGT
ATFMICGNIC TRACKFCNVP TGCPLPLNPN EPMEIAQSVE ALKLKHVVLT SVDRDDIKDF
GASHWVKVIR AVKQKTPNVT MEVLIPDFQG HEDLVSMIIE AKPEVISHNL ETVRRLSPHV
RSRATYDTSL KVLKQIADSG LVCKSGIMLG LGETRAEILE TMDDLRKINC KVMTIGQYLR
PSIKNIEVKE YVRPEVFEEY KQIGLEKGFS FVESGPLVRS SYHAEKHVLS
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