Gene TDE1549 details

Gene Information

• Locus tag: TDE1549
• Symbol: recR
• ID: 2740911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1592280
• End bp: 1592867
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637160431
• Product: recombination protein RecR
• Protein accession: NP_972155
• Protein GI: 42527057
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00118167
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGCTA TTGATGCAGT TATAGACTCA TTTTCCCGCC TTCCCGGTAT AGGTCATAAG 
AGTGCTGCCC GCATCGCCTA TCATCTTCTA AAACAAGGGC CTGCGGATGC CTTGCGTTTA 
GCGGAAGCTG TTTCTACCTT ACACGAGAAA ATTCATCCTT GTACTATATG CGGTTCTTAT 
ACGGAAGATG AGATTTGTTC TATTTGTGCG GATGAAACAA GGGATAGGGC AACTATCTGT 
GTAGTAGGCT TTCCTCAGGA TGTGAATACA ATTTCTTCAA TCCCCGAATA TAGAGGATTG 
TTCCATGTTT TGGGCGGACT TATAGCTCCC CTTGAAGGTA TAGGCCCCGA TCAATTACAT 
ATAAGTGAGC TTATCAGACG TATTCATGAA GGCGGAATTA CCGAGGTTAT TCTTGCAACC 
AACCCTACGA TTGAAGGCGA TACTACGGCC CTGTACATTC AAAAAATATT GCAGGACCTG 
CCTGTTAATA TAACAAGGCT TGCCTCAGGC TTACCTGTCG GAGGCGATTT GGAATATGCC 
GATCGTTTGA CCCTTGCAAG GAGTTTAAAC GGCCGCATTA AATTTTAA 

 

Protein sequence

MNAIDAVIDS FSRLPGIGHK SAARIAYHLL KQGPADALRL AEAVSTLHEK IHPCTICGSY 
TEDEICSICA DETRDRATIC VVGFPQDVNT ISSIPEYRGL FHVLGGLIAP LEGIGPDQLH 
ISELIRRIHE GGITEVILAT NPTIEGDTTA LYIQKILQDL PVNITRLASG LPVGGDLEYA 
DRLTLARSLN GRIKF