Gene TDE1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1509 
Symbol 
ID2739715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1556529 
End bp1557194 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content36% 
IMG OID637160389 
Productlipoprotein releasing system, ATP-binding protein, putative 
Protein accessionNP_972115 
Protein GI42527017 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000891306 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTAA AAACAAAATC GCTTTCCAAA TCCTTTGCCA GAGGTAAGAA CTCTTTTTTT 
GCAGTAAAAG ATGTTGACTT TTCCATTTCT GCTTCCGATT TTGTATTCAT TGTAGGGCGT 
TCGGGTTCGG GAAAAACAAC CTTTCTTAAT TTGATATCCG GTATTTTAGA TCCTACCCAA 
GGGCAGGTTT TTTTTGAAGA TCAGGATATT TCTTCTATGA ATGATACCGA TAAAAGCTTT 
TACCGAAACG AGTCGATAGG TTTTGTTCCT CAGTCTTTAG CTTATTTGCC GAACCTTTCG 
GTCTTTGATA ATGTAAGGGT TCCGTTTTTT TTATTTAACA GGGACGGCGA CAGCGAGGGA 
AGGGCTTTAA GCCTCTTGGA CTTGATGGAT ATAGCTCATT TAAAAAATGA GATGCCCCAA 
AATTTATCCG GCGGAGAACT AAAGCGAATG TTGATTGCAA GAGCTCTTAT GAATTCTCCT 
AAATTACTTA TTGCAGATGA ACCTACGGCA AATCTTGACA AGGAAACTTC TGAAACGGTT 
ATGAATCTTA TAAAAAGTGT TAATAAACTG GGAACCGCCG TTTTGATTGT AACACATGAT 
TTTGAAATTT TAAATGAAAA TAGTCCCATA TATAGAATGA ATGATGGAGA ATTAACGAAA 
ACTTGA
 
Protein sequence
MLLKTKSLSK SFARGKNSFF AVKDVDFSIS ASDFVFIVGR SGSGKTTFLN LISGILDPTQ 
GQVFFEDQDI SSMNDTDKSF YRNESIGFVP QSLAYLPNLS VFDNVRVPFF LFNRDGDSEG 
RALSLLDLMD IAHLKNEMPQ NLSGGELKRM LIARALMNSP KLLIADEPTA NLDKETSETV 
MNLIKSVNKL GTAVLIVTHD FEILNENSPI YRMNDGELTK T