| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1507 |
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| Symbol | sdhB |
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| ID | 2739713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1555152 |
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| End bp | 1555814 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637160387 |
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| Product | L-serine dehydratase, iron-sulfur-dependent, beta subunit |
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| Protein accession | NP_972113 |
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| Protein GI | 42527015 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000296361 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATCT TTGATATTAT AGGCCCGATT ATGATAGGGC CGTCCAGTTC GCATACGGCA
GGAGCCGTAA GAATAGGCTA TTTAACAAGG GTTCTTCTTG CAGAACCTGC TATAAAAGCA
AGAGTGTACT TACACGGATC TTTTGCCTAC ACCTATAAGG GGCACGGTAC CGACAGGGCT
ATTGCAGCAG GTATTATGGG AATGAAACCT GAAAACGAGC GTATAAGAAA CAGCCTAACC
CTTGCAAAAG AACAAGGCTT GGACATCACC TTTGAACCTA TAGATATTCC TAATGCCCAT
CCCAACACGG CATTGATTGA AGTTACCGGT ATTGACGGAA AGGAGCTTTC CGTGCAAGGC
TCCTCCATAG GAGGCGGGAA TATTCTAATT ACCAAAATAA ACGGAAAACC TGTAGAGCTA
AGCGGTAAAA ACCCTACACT GGTAGTAGAA TATCAAGATA TCCCCGGAAG AATAGCCGCC
ATAACAAGCG TAACGGCAAA ACACAAGATA AATATTTCGC AAATTCATAT CGGAAGAGAT
TACCGAGGGG GAACCGCCAC AATGTGCCTT CAAATGGACG GTTTAAGCGT CGGCCCGGAA
TTAAAGGAGG ACATTTTGCA AATAGACCAC ATCTACAATG TTATCCTGAT TCAGCCGGTA
TAA
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| Protein sequence | MDIFDIIGPI MIGPSSSHTA GAVRIGYLTR VLLAEPAIKA RVYLHGSFAY TYKGHGTDRA
IAAGIMGMKP ENERIRNSLT LAKEQGLDIT FEPIDIPNAH PNTALIEVTG IDGKELSVQG
SSIGGGNILI TKINGKPVEL SGKNPTLVVE YQDIPGRIAA ITSVTAKHKI NISQIHIGRD
YRGGTATMCL QMDGLSVGPE LKEDILQIDH IYNVILIQPV
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