| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1398 |
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| Symbol | |
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| ID | 2741265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1437332 |
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| End bp | 1439518 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160277 |
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| Product | hypothetical protein |
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| Protein accession | NP_972004 |
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| Protein GI | 42526906 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGG CATGGACATT AAAGAAAAAT AACAGCGGAA AGTGGTTTTT AACCTTTACA
GCCTTAATTG AGTCTGAAAA TTGCCCCTCA GCCGATGAGA TTCATCTTGA GGCAAAAAGA
AAAGGAATAA AAAGCTCATC TCTGGTAAGT AAAAAAACTA TTGAGGACTA TTTAAAAAAA
CATACCGGCT CCGGCATAGA ACCCGTTTCA CTGCCGCTTG AGCTTGATCC CAACTTTGAT
GCAAGAATTA CGACAAATAA CGACAAAACG GCGGCCTATC TCTATGTAAG AAAGGCTGCC
GATTCCGCTA ACGAAGTGGA CATGTCTACT ATAAACAGAC TTCTCCAGAG AAGTAATATT
GCAAATATCG ATACGGAAAA AGTAAAAGAA GGTTTAAGCG ATTTTATAAA TTCTTCAGAG
ATGGAATTCT CGATGCAGAT TGCTGAAGGT TCTCCCCCAA AAAGAGGGCC CGATAAAAAA
CTTATTACTC ATTTTGAGCA AATACCTGAC CATGAGGTAC AGCGTTTGGC AGACCGTTTA
AAGAGGCCCG ACTTACGTAC CCCTGATGTG GAAAACCCCA CGACAGACAA AGATTATCCT
CTTTCCGAAG CTGAAACCCT TACGGTTGTC GAAAAAGGCG ACCTTATTTA TGAGGTTGAA
GATGCAGGAT TGGGAGAGGC CGGTGTTGAT GTATACGGTC AGTCTATTCC CGGGCTTCCG
GGCAATGACC CTTTTTTCTT GGATTTACGA AACATAGTAC AAAACCATTC AGAGTTGCGT
GCAGGAGAAA CCGGCCTTCT TTTAATAGCA AATACCGAAA GAGGTTTAAA GATTCGCATA
GTTCCATATA GGGATGCAAA GGTAAGAGCG GTAATAAGCC GCGATAAGAT GGAAGTTTCT
CTTATTTTGC AGTCGGGACT GGGTGCAGGA GAAAGACTTT CGGTAATAGG CGTAAAAACC
GCATTAAACG AAGTCAACCT TCTCGACTCA ATTTCGGACG CAAAAATAAA CGAAATTATA
GAATCTGCAA GAAAGGTAAA CGATGAATGC GAGTTTGTAA TATTAAGCGG AACTCCTCCG
ATTGCTCCCG GCTCTTATAG GCTTGAATGG TCGATTAAAT TTAATGAAGA GCTTAGTACG
GCAACTGTAG AAAAGGATGC TCTGATTTTG ACAGCCCGTC TTTTACCTAA GGGAGAAAAG
GGTAAAAATG TTTTTGGTGA GTTGATTGAC CCTAAAAATG CCGAGCCAAC GGATTTGCCT
GCTAATGATG AAACAATAAA AGTTACCGAA GAAAAGCACG TTATTAAGTT TTTTGCTGCA
GAATCGGGAG AGCTTTCTTT TTTTAACAAT GCCCTTGTAA TATCTTCGCT TAAAACCATT
CAAAGCGATA TAGATACCAA ATTCGGCGAT ATAAGTTTTC CCGGCAACCT GATTATTACC
GGAGATATTA AAGATGACGT AAAGGTAAAA TCAAAGGGAA AATTGACAAT TACCGGAACT
GTAGAAAAAG CTCTGATTTA TTCTGAGGAT TCTCTTACCT TAAACGGCGG TATAAACGGA
AAGGGAAGGG GAACCGTTTG GGCTAAGGAT AAAACCGATT TACAATATGC GGAAAATGCC
AGAGTTTTTT CGGGCGGCGA TATAAGTATA GCTTCTTACT GTTTTAAGTG TTTGGTAAAA
ACAAACGGTA CCGTTCATTT GACAGGCAAC CCCGGTGTAC TGCTCGGCGG AAGCATCCAT
GCTGCAAAGG GTGTTTCGGT TCATGACTTG GGGGCCGAAA AAACCATAAG GACAATTATC
TCGTTCGGAC AGGATTACTT GATAAAAGAT GAAATTGAAG TCCGTGAAAA AGAAATAGAA
GATAATAATG CCGAGCTTGC AAAAATCGAA AAAGACTTGC AGGCAAATCC CCCTGATGTC
GATGCCTTAA GACAGAAAAA GGTTAAGCTT TTAAAAAGAA ACAGTGCTCT TACGGTCCGC
ATATTTAATC TAAAAGAAAA TTTTGAATTT CACATTCCTT CAAAAATAAA GGTTACAGGT
TCGGTTTATC CGGGCGTTGT TCTTGAAAGC CACGGACGCT ATTTTGAAGT TATGGAAACT
CATCATAACG TATTTTTTGA GTTCGATGAA AAAAACGGGC AAATTATATG TTCGCCTATT
AAAGAAGTTG AAGTTGAATT AGAATAA
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| Protein sequence | MEKAWTLKKN NSGKWFLTFT ALIESENCPS ADEIHLEAKR KGIKSSSLVS KKTIEDYLKK
HTGSGIEPVS LPLELDPNFD ARITTNNDKT AAYLYVRKAA DSANEVDMST INRLLQRSNI
ANIDTEKVKE GLSDFINSSE MEFSMQIAEG SPPKRGPDKK LITHFEQIPD HEVQRLADRL
KRPDLRTPDV ENPTTDKDYP LSEAETLTVV EKGDLIYEVE DAGLGEAGVD VYGQSIPGLP
GNDPFFLDLR NIVQNHSELR AGETGLLLIA NTERGLKIRI VPYRDAKVRA VISRDKMEVS
LILQSGLGAG ERLSVIGVKT ALNEVNLLDS ISDAKINEII ESARKVNDEC EFVILSGTPP
IAPGSYRLEW SIKFNEELST ATVEKDALIL TARLLPKGEK GKNVFGELID PKNAEPTDLP
ANDETIKVTE EKHVIKFFAA ESGELSFFNN ALVISSLKTI QSDIDTKFGD ISFPGNLIIT
GDIKDDVKVK SKGKLTITGT VEKALIYSED SLTLNGGING KGRGTVWAKD KTDLQYAENA
RVFSGGDISI ASYCFKCLVK TNGTVHLTGN PGVLLGGSIH AAKGVSVHDL GAEKTIRTII
SFGQDYLIKD EIEVREKEIE DNNAELAKIE KDLQANPPDV DALRQKKVKL LKRNSALTVR
IFNLKENFEF HIPSKIKVTG SVYPGVVLES HGRYFEVMET HHNVFFEFDE KNGQIICSPI
KEVEVELE
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