| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1364 |
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| Symbol | valS |
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| ID | 2739465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1404903 |
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| End bp | 1407632 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637160243 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | NP_971970 |
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| Protein GI | 42526872 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA AATTGCAGGC GATTGAATTG GAAAAATCTT ATAATCCTAA AGAATTTGAA
GAGCGTATTT ATTCCTTTTG GGAAGCCAAT AAGTGCTTTA GCCCGATAAA AAAGAAAAAC
ACAAAAAATA CATTTACTGT CGTCATTCCT CCGCCCAATG TTACGGGCGT TCTCCATGTA
GGCCATGCCC TTGATGAAAC CTTGCAGGAT GTAATTGTCC GTTACCACCG TATGAAAGGG
GACGAAACCC TTTGGATTCC CGGAACCGAT CATGCAGGTA TTGCCACGCA ATCCGTTGTA
GAAAAAAAAC TGAAGGCCGA AGGCAAAAAC CGCCGCGACC TCGGACGGGA AGCTTTTATC
GAAAAGGTAT GGGAAGTTAA AAATGAACAT CACTCGATTA TAACAAAGCA GCTCCGCAAA
ATGGGAGTTT CGGTTGATTG GGATAGGGAA CGCTTTACCT TAGATGAAGG GCTTTCTCAG
GCTGTAAGAG AGGTCTTTGT TTCTTTATAT GAACAGGGGC TAATCTATCA GGGAAATTAC
CTTGTAAACT GGTGCCCTTC ATGCGGTACC GCAATTTCCG ATGATGAGGT CGAACATGAA
GACCGAAAGG GCGGCATGTA CCATATTTAT TATAAATTGG CAGACGGGGC AGTTTTACAA
AATGAAGCCG GCGAGAAAAT ACAAGAAATA GAAATTGCAA CCACCCGCCC TGAAACCCTT
TTGGGCGATA CCGCCATAGC CGTTCATCCC GAAGACCCCC GCTATGCTTC CATCATAGGA
AAGGAAGTAA TTCTCCCTCT CGCAAATAGG AAAATTCCTG TAATTGCCGA TTCCTATGTC
GATAAAGAAT TCGGAACGGG GGTTGTAAAG ATAACTCCTG CCCATGACCC CAATGACTGG
GAGGTAGGTA AAAGGCATAA TCTTCCCGTT CTAAATATCT TAAACCCCGA CGGAACATTA
AACGATGCCG TTCCCGAAAA ATACCGAGGC CTTTCAACGG AAAAAGCACG CAAGGCCGTT
ATCGAAGATT TGGAAGAACT GGGCCTTTTT AAAAATGAAG AAAAAATAAA ACACGCAGTA
GGCTGCTGTT ACCGATGTCA TACAAGTATA GAGCCCTATG TTTCAAAACA ATGGTTTGTA
AAAATGCAGC CCTTGGCTCA AAAAGCCTTA GATGCATGGA AAAAAGGCGA TGTTGTTTTT
TATCCTCAAA AATGGGAAAA CACCTATGCT CACTGGATGA ATAATATTCG CGACTGGTGT
ATTTCCCGTC AGCTTTGGTG GGGGCATCGT ATTCCTGTTT GGTATTGCGC CGATTGCGGA
AAAACTATCG TAAGCCGTAC GGATATTACG GAATGTCCTC ACTGTAAATC AAAAAACATA
AAGCAGGATG AGGATGTTTT AGACACTTGG TTTTCAAGCT GGCTTTGGCC TTTTTCAACC
CTCGGCTGGC CCGAAAAGAC CGAAGACCTC GCACGCTTTT TTCCGACATC GGCCCTTGTT
ACAGGACACG ATATAATTTT CTTTTGGGTA GCAAGAATGA TAATGGCCTC CTTGCAGTTT
ACGGGCAAGG CTCCTTTTAA AGATATTTTT ATTCACGGTT TGGTTCGGGA TAAACAAGGC
CGCAAGATGA GTAAGAGCTT GGGAAACGGT ATTGACCCCC TTGTAGCCAT CGAAGAGTTT
GGGGCTGACG CTATGAAGTT CACCCTTACC TTTATGTGCG GTTCTCAAAG TCAAGACTTC
TTAATCGACA TGGAAAGTTT TAAGCTCGGC TCAAAATTTG CAAACAAGGT TTGGAACGCT
TCCCGATATA TTTTAGGAAA TCTTGCAGGC AGAACCATTG TGCCTGTCGG ACGGGACGGC
AGTCTAAACA GCTTAAAAGA ACTTGACCGC TGGATTTATC ATGAACTAAA CGAGGCGGCT
CAAACGGTTC GCTCAAGCCT CGATTCTTAC CGTTATAATG AGGCCGCTCA AAAGGTTTAC
GAATTCTTTT GGAATAATTT TTGTGATTGG TATGTTGAAG GTACTAAACT TTCTTTTAAG
TACGGAGACG AAAAAGAGAA GGATAGGGCG GCTTCGGTGC TCCTTGCCGT TTTGGAAGAA
TCCTTACGCC TGCTTCATCC GTTTTTAGCC TTTGTTACCG AAGAGATTTA TTCAAAGCTG
CCCGGTAATT GTGCTGAAGG CGCCTTGCCC CGTGCCAAGA TTTTAATGAC TTCCGATTAC
CCCGAAGAAA AAAAAGAACG CATAGATGAG GCTGCTTCTA TCCGTTTTAG GACCTTGCAG
GAAATTGTCC GCAACATTAG AGCCTTACGG GCCGAATGCG GCATAGACCC TCAGTTAAAG
CTTAAGGTTT CTCTTTATAT CGAGAAAAAC TCTCCTGCGG AAGCTGCCCG TGAAAATTCC
GAAATAATAG AAATGCTTTC AGGCCTTTCC GGTTTAGACT TTATCGATTC TCTTAAAGAA
AAACCTGCCT CTTCAATCGG TGTAGTAGGA GCGGGTTTTG AGGCTTTTTT GATAACGGGA
GATTCAATAG ATATCGATCA ATTAAAAAAG CGTTTTGAAA AAGAGCTTGA AAAAAATGAA
CAAAATGCTT CAAAGATAGA TTCTAAGCTC AAAAACGAAA ACTTCGTTAA AAACGCTCCT
CCCGAAGTCA TCGAAGGCGA AAAAGAAAAA CACGCCGAGT TTTTAAGGCG TATCGAAAAA
CTAAAAGGTT ATTTGGAAGG GATGAGGTAG
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| Protein sequence | MSEKLQAIEL EKSYNPKEFE ERIYSFWEAN KCFSPIKKKN TKNTFTVVIP PPNVTGVLHV
GHALDETLQD VIVRYHRMKG DETLWIPGTD HAGIATQSVV EKKLKAEGKN RRDLGREAFI
EKVWEVKNEH HSIITKQLRK MGVSVDWDRE RFTLDEGLSQ AVREVFVSLY EQGLIYQGNY
LVNWCPSCGT AISDDEVEHE DRKGGMYHIY YKLADGAVLQ NEAGEKIQEI EIATTRPETL
LGDTAIAVHP EDPRYASIIG KEVILPLANR KIPVIADSYV DKEFGTGVVK ITPAHDPNDW
EVGKRHNLPV LNILNPDGTL NDAVPEKYRG LSTEKARKAV IEDLEELGLF KNEEKIKHAV
GCCYRCHTSI EPYVSKQWFV KMQPLAQKAL DAWKKGDVVF YPQKWENTYA HWMNNIRDWC
ISRQLWWGHR IPVWYCADCG KTIVSRTDIT ECPHCKSKNI KQDEDVLDTW FSSWLWPFST
LGWPEKTEDL ARFFPTSALV TGHDIIFFWV ARMIMASLQF TGKAPFKDIF IHGLVRDKQG
RKMSKSLGNG IDPLVAIEEF GADAMKFTLT FMCGSQSQDF LIDMESFKLG SKFANKVWNA
SRYILGNLAG RTIVPVGRDG SLNSLKELDR WIYHELNEAA QTVRSSLDSY RYNEAAQKVY
EFFWNNFCDW YVEGTKLSFK YGDEKEKDRA ASVLLAVLEE SLRLLHPFLA FVTEEIYSKL
PGNCAEGALP RAKILMTSDY PEEKKERIDE AASIRFRTLQ EIVRNIRALR AECGIDPQLK
LKVSLYIEKN SPAEAARENS EIIEMLSGLS GLDFIDSLKE KPASSIGVVG AGFEAFLITG
DSIDIDQLKK RFEKELEKNE QNASKIDSKL KNENFVKNAP PEVIEGEKEK HAEFLRRIEK
LKGYLEGMR
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