Gene TDE1352 details

Gene Information

• Locus tag: TDE1352
• ID: 2739453
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1391840
• End bp: 1393693
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637160230
• Product: penicillin-binding protein
• Protein accession: NP_971958
• Protein GI: 42526860
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATA CTGAAGATAG TTTAAATTCA CGGCTTAGGT TATTTTCAAT CTTCGTTTTT 
TTTATTTTGA TAGCTTATAC TTATAAACTG TTTTCAATGC AGATCATTCA CGGAGATCAG 
TTTAAGCAAA AGTCACAAAA TATTTCAAAG CGGACAACCG TTATACCGGC TCAAAGAGGC 
GAGATATTTG ATAGAGAAGC AAATACGCCG ATGGTTTTAA ACATCGACTC CTTCGCTGTT 
GATATTGTAC CCGGAGAGGT CCCTCGTCAG GAATTCGATA CCGTAATAAA CAGGTTAAGT 
TCAATCTTAA AAATTCCTGT TTCACAGATA GAAAAAAAAT TGCCGGTAAG TGTTAGGAGA 
GATTTTAGAT CAATACAAAT CAAATCCAAT GTCGATTATT CCACGGTTGT GCAAGTGGCA 
GAAAGCATCG ATTCTCTTCC GGGGGTTTCA TGGCACTCAA AACCTGTCAG AAACTATGTA 
GATACCCGTT CTTTTTCTCA CATAATAGGC TATGTAGGCG ATATAACTAC GGACGAATTG 
ACCCGCTTTT ATAATAAGGG GTATACCTCA AACAGCATAA TAGGCAAGGC CGGAATCGAA 
AAACAATATG ACGAAATTTT ACGCGGTACC GATGGGGTGG AATACCGGAC TGTAGATGCC 
AAGGGCAGAT ACATAGAAAA CACCACAGTT GTAACACCGC CTAAGATGGG AAATAACCTT 
GTTCTTACTA TCGACAAGAG AATTCAAAAA CTGGCAGAAG ATGCTTTGGG CCCCAGAATA 
GGGGCTGCTG TCGTATTAAA ACCTACAACA GGCGAGGTCC TGGCAATGGT TTCCTATCCT 
TTTTTTGATC AAAATATTTT CGGCAAGGAA ATCTCAAGTT CTCTTGCAAA AGAATTGTTT 
GAAAATCCCG ATAAGCCGCT TTTAAACAGG GCTGTAGATG CTGCCTATCC TCCTGCTTCA 
ACATTTAAGG TTATCATGAA CACCGCCATT TTAAACGAAA AAGCCTTTCC GCCTGAAACA 
ACGGTACCTT GTTTGGGAGA AATTGAATAT GGAAACCGAG TATTCCGCTG TCATATAAGA 
AAACCGGGGC ATGGAAAATT GGCTTTAAAC GAGGCTTTGG CAAAATCATG TGATATTTAT 
TATTGGACGG TTTGCCGCGA TTATTTGGGT GTTGAAAAAA TTGTCGATTA TGCAAAGCGT 
TTCGGGCTGG GTCAGTCCAC GGAGATAGAC CTGCCCAGTC AATCCGATGG TTTTGTTCCG 
TCGCCTAGAT GGAAGGAGCG TCGTTTCCAT GAAAAATGGC TTAACGGAGA TACAATGAAT 
ATGTCTATAG GTCAAGGTTT TACTCTTGCT TCTCCGCTTC AGGTAGCAAA CATGGCATGT 
ATGGTTATAA ACAATGGTGT AATCTATAAG CCCCACCTTT TAAAAGAAAT AAGAGATCCT 
TCAAGCGGTG AGGTTATAAA AACCGTTCAG CCTGAAATTC TGCATAAAGA AAATATCGGT 
AAGGAAGTTT TTGAACAAGT CAGACAGGCT ATGAATCTTG TTACGATACA GGGAGAGGCC 
CGCTATCCTA TGAAAAATCC CATGTTCCGT TTTGCAGGCA AAACGGGAAC TGCTGAAGTC 
GGCTTACATG ATAGGTGGCA TTCATGGATG GTAGCTTACG GTCCCTATGA CGCACCTCCT 
AAGGACATCA TAGTAGTCAG CGTTATTGTA GAGGCTGTAA ACGAGTGGGA ATGGTGGGCT 
CCTTATGCTG CCAATATAAT ATTGCATGGA ACACTTGCAA ATCAAACCTA TGATGAAACT 
ATAGACTATC TCGGCTTTAG GCATCTTCCT GCAGTTGTAA GGAGAAGCGA ATGA 

 

Protein sequence

MKNTEDSLNS RLRLFSIFVF FILIAYTYKL FSMQIIHGDQ FKQKSQNISK RTTVIPAQRG 
EIFDREANTP MVLNIDSFAV DIVPGEVPRQ EFDTVINRLS SILKIPVSQI EKKLPVSVRR 
DFRSIQIKSN VDYSTVVQVA ESIDSLPGVS WHSKPVRNYV DTRSFSHIIG YVGDITTDEL 
TRFYNKGYTS NSIIGKAGIE KQYDEILRGT DGVEYRTVDA KGRYIENTTV VTPPKMGNNL 
VLTIDKRIQK LAEDALGPRI GAAVVLKPTT GEVLAMVSYP FFDQNIFGKE ISSSLAKELF 
ENPDKPLLNR AVDAAYPPAS TFKVIMNTAI LNEKAFPPET TVPCLGEIEY GNRVFRCHIR 
KPGHGKLALN EALAKSCDIY YWTVCRDYLG VEKIVDYAKR FGLGQSTEID LPSQSDGFVP 
SPRWKERRFH EKWLNGDTMN MSIGQGFTLA SPLQVANMAC MVINNGVIYK PHLLKEIRDP 
SSGEVIKTVQ PEILHKENIG KEVFEQVRQA MNLVTIQGEA RYPMKNPMFR FAGKTGTAEV 
GLHDRWHSWM VAYGPYDAPP KDIIVVSVIV EAVNEWEWWA PYAANIILHG TLANQTYDET 
IDYLGFRHLP AVVRRSE