Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1350 |
Symbol | mreC |
ID | 2739451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1390467 |
End bp | 1391330 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637160228 |
Product | rod shape-determining protein MreC |
Protein accession | NP_971956 |
Protein GI | 42526858 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA AACTTTCGCT TAAACTAAAT CTAGAAGTTT TTCTTTTAAT TTTATTTCTT CTCATATCAT CTGTTTTTAT GGCCTTTTCC GGAGGTTCTT TTATTTTGGA TTTTAAGAGC ATGGCCTTTT CGGTAAGTGC CGGAACGGAG AAGGCTGTTT ACAATGTTTC TTCCTTTGTG GGAGAAAGCG TTTCTTCCGT AAGGGAATTA TGGGATCTAA AAGCAAAGTA TAATGAACTT ACAAAACAGC TTGAAAAGTA CGAACTTTTG GAGCGTTCCA ACGCCGATAT AAAAAGAGAG AATAATGAAC TTCGTACCCT TCTTAAATTT ACCGATAGCA TTCAGATTGC AAATATCCCT GCAGAAATAA TAGGCTATGA TCCTAATGCT CTTTATTCGG GAATGATTAT TAACAGGGGC GTAAAGCACG GTGTCAGAAA AGACATGCCC GTTATTGCTT TTCAAAACGG AAATATGGCC CTTGTAGGAA AAATCTTGCA GGTAGGAAGG GGCTCATCTA TGATTATTCC TATCTATGAT TATCAGTGTC ATGTTGCTGC GAAGGTGGAC CTTGTAAACC ACCGCGGTGT TGTAAGCGGA CAAGGCTCTG AGGACTCTCC ATTAATTATG AAGTACATAA AGAAGAGGGC AGGAGATGAC ATTAAGATTG GGGATAAAAT AATTACCTCC GGCTTCGATG ATTCCTCGAT TTTTCCAAAA AATATTCCCA TAGGTTTTGT TTCTAAAATT AAAACACATG ATTATGAAAC TTCGCTTGAG CTATCTGTAA ATCCTATAAT AGATTTTTCT TGTTTGGAAT ATGTTTTTGT ACTTGATACT TCAAAAATAG AAAAGGAGTT TTAA
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Protein sequence | MKKKLSLKLN LEVFLLILFL LISSVFMAFS GGSFILDFKS MAFSVSAGTE KAVYNVSSFV GESVSSVREL WDLKAKYNEL TKQLEKYELL ERSNADIKRE NNELRTLLKF TDSIQIANIP AEIIGYDPNA LYSGMIINRG VKHGVRKDMP VIAFQNGNMA LVGKILQVGR GSSMIIPIYD YQCHVAAKVD LVNHRGVVSG QGSEDSPLIM KYIKKRAGDD IKIGDKIITS GFDDSSIFPK NIPIGFVSKI KTHDYETSLE LSVNPIIDFS CLEYVFVLDT SKIEKEF
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