Gene TDE1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1350 
SymbolmreC 
ID2739451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1390467 
End bp1391330 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content36% 
IMG OID637160228 
Productrod shape-determining protein MreC 
Protein accessionNP_971956 
Protein GI42526858 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA AACTTTCGCT TAAACTAAAT CTAGAAGTTT TTCTTTTAAT TTTATTTCTT 
CTCATATCAT CTGTTTTTAT GGCCTTTTCC GGAGGTTCTT TTATTTTGGA TTTTAAGAGC
ATGGCCTTTT CGGTAAGTGC CGGAACGGAG AAGGCTGTTT ACAATGTTTC TTCCTTTGTG
GGAGAAAGCG TTTCTTCCGT AAGGGAATTA TGGGATCTAA AAGCAAAGTA TAATGAACTT
ACAAAACAGC TTGAAAAGTA CGAACTTTTG GAGCGTTCCA ACGCCGATAT AAAAAGAGAG
AATAATGAAC TTCGTACCCT TCTTAAATTT ACCGATAGCA TTCAGATTGC AAATATCCCT
GCAGAAATAA TAGGCTATGA TCCTAATGCT CTTTATTCGG GAATGATTAT TAACAGGGGC
GTAAAGCACG GTGTCAGAAA AGACATGCCC GTTATTGCTT TTCAAAACGG AAATATGGCC
CTTGTAGGAA AAATCTTGCA GGTAGGAAGG GGCTCATCTA TGATTATTCC TATCTATGAT
TATCAGTGTC ATGTTGCTGC GAAGGTGGAC CTTGTAAACC ACCGCGGTGT TGTAAGCGGA
CAAGGCTCTG AGGACTCTCC ATTAATTATG AAGTACATAA AGAAGAGGGC AGGAGATGAC
ATTAAGATTG GGGATAAAAT AATTACCTCC GGCTTCGATG ATTCCTCGAT TTTTCCAAAA
AATATTCCCA TAGGTTTTGT TTCTAAAATT AAAACACATG ATTATGAAAC TTCGCTTGAG
CTATCTGTAA ATCCTATAAT AGATTTTTCT TGTTTGGAAT ATGTTTTTGT ACTTGATACT
TCAAAAATAG AAAAGGAGTT TTAA
 
Protein sequence
MKKKLSLKLN LEVFLLILFL LISSVFMAFS GGSFILDFKS MAFSVSAGTE KAVYNVSSFV 
GESVSSVREL WDLKAKYNEL TKQLEKYELL ERSNADIKRE NNELRTLLKF TDSIQIANIP
AEIIGYDPNA LYSGMIINRG VKHGVRKDMP VIAFQNGNMA LVGKILQVGR GSSMIIPIYD
YQCHVAAKVD LVNHRGVVSG QGSEDSPLIM KYIKKRAGDD IKIGDKIITS GFDDSSIFPK
NIPIGFVSKI KTHDYETSLE LSVNPIIDFS CLEYVFVLDT SKIEKEF