Gene TDE1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1321 
Symbol 
ID2739579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1359475 
End bp1360083 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID637160198 
Producthypothetical protein 
Protein accessionNP_971927 
Protein GI42526829 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.353433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTT TAATGCGGTA TGCTTCAAGT GAGCTCAACG TAAAAAGCTC AAGATTTTTA 
GCGGAAATTT TTCCTATAAA TTCGGCCGCC GAAGCCAGAG AACTTTTAAA AAGCCAAAAG 
GGAAAATACG AAGATGCCCG CCATGTAGTC CATGCCTTTA TTGCAGGCGA AAACGGAGAG 
GTTTTAGGCT GTTCCGATGA CGGAGAACCT TCGGGAACTG CCGGCCGGCC GGCTCTTGCA 
GTGCTCAAGG GTTCAGGAAT CACAAACATA ATGCTTACAA TTACACGCTG GTTCGGCGGC 
ACCCTTTTGG GAACAGGCGG TTTGGTAAAA GCTTACTCGG ATTCTGCAAA ACTTGTTCTT 
CAAGAAGCTT CAACCGAAGA GCTTATCAAA AAAGAGCCTT TTCAATTTGA ATGCTCTTAT 
TCCGAATGGG AAAATTTAAA ACGCAGTCTT GATGAATTTT CGGTTGAAAT GTTACAAGCC 
GATTACAGCG AAAAGGTAAG GGTAAACGGT CAAATTCCTT TAGAAAAAAA AGCACCCTTT 
GAAGCCTTTA TTGAAAATGC TTCAAAGGGC GGTATAAGTT TAGTCTTTCC AATGTATGAC 
AGGTTTTGA
 
Protein sequence
MKVLMRYASS ELNVKSSRFL AEIFPINSAA EARELLKSQK GKYEDARHVV HAFIAGENGE 
VLGCSDDGEP SGTAGRPALA VLKGSGITNI MLTITRWFGG TLLGTGGLVK AYSDSAKLVL 
QEASTEELIK KEPFQFECSY SEWENLKRSL DEFSVEMLQA DYSEKVRVNG QIPLEKKAPF 
EAFIENASKG GISLVFPMYD RF