Gene TDE1314 details

Gene Information

• Locus tag: TDE1314
• ID: 2739572
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1351314
• End bp: 1353176
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637160191
• Product: penicillin-binding protein
• Protein accession: NP_971920
• Protein GI: 42526822
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAG TAGATAGTTT TATTTCAAAA CCTAGGTTTT GGTTTTTTAT AAGTCTTGTA 
ATTATTTTTG TTGTTTTGCT TATACTCCAA TTTGCAAAGT ACATGATAAT GAAAGAACCT 
ATAGTGATTA CGCCTAAGGT TTCGACTGAA AGGGGGACTA TATATGACAG AAATAAAAAA 
ATCCTTGCAG TTCAGACAAC TATCTATAAT CTTTATGCCG ATAAAACCCT TATGAAAAAT 
CCTGCCGAGG CGGCGAAGGT CTTGGCCCCT GTTTTAATGC AAAATGAATC CGATCTCTTG 
GAAAAAATTC AAGATTCCAA ATCCAATTTT TTATATTTAA AAAAAAGAAT GAGCGAAAGT 
GAAAGGGATT TGGTTAAAAA CGTTATAGAT GAAAATAAAT TAAGCGGTAT TAGGTTTGAG 
TCTGTGTTTA ACCGCACCTA TCCCGAAAAT ACCTTAGCCT CTACAGTCGT AGGTTTTTTA 
GGTGATGACG GCAGGGGTAA AACAGGCGTA GAATATTCTC TTCAAAATAT TCTCTCTCCC 
CCTCCTGAAA CAAAGGGCTA TACTGGCAAA GGCTACGACG TTTATCTCAG TATAGACGGA 
AACATTCAAT ACATGCTCGA AAAAATTATA TCGAAAACGA TGGAAGAAAC AAAGGCTCAA 
TCTGCCGTTT TTCTTGCAGT TGATGCAAAG ACCGGAGAGG TCCTCGCCTA TGTGAACTCT 
CCTTCTGCCT CCCTTGCAAA CTTTATCGAA AGCACTCCTG AACAGCGCCT TGATCGTCCT 
GCAAACTATG TTTATGAGCC GGGGTCGGTT TTTAAGATAT TTTCTATGGC CGCCTTTTTG 
GAATTGGGCA CTACTAAGGA CGGGCAGGTA TACGACTGCA ATGCTCTTTT TGAATTTAAC 
AGACCCAATG TAAAACCCAT TACCTGTTTA AAGACTCATG GCAGGGTAAG CCCGCGGGAT 
ATAATCCGCC TTTCGTGTAA CGATGCAACT GCCCAGATTG CCGATATTAC CGAAAAAAAT 
GCTTTTTATG AAAAGATTAA ACTCTTCGGT TTCGGCTCCA AAACCAATAT AGAGCTTCCG 
GGAGAGTCGG CCGGTCTTCT TGCTCCTCCT CAAAACTGGT CTATACGTAC AAAGCACACA 
ATCGCTATAG GACAGGAAAT AGGAGTTTCA GCATTGCAGC TGGTTGAAGC TGCAACGGCA 
TTCACCAATA AGGGTTACAC TTTGAGGCTT TCTCTTATTT CGAAGGTTGC CGACAAGGAA 
GGAAACATCG TCTACCTTCA TAAGCCCTCG GTTTTAAACA AGGTTATATC CGAAAAAAAT 
GCCGATCTGC TTTTAAGCTA TATGAGAACG GGCTCCATAG AGGGTATAGC TTGGAGGGCT 
TCTATCAACG GAGTTCCCAT TGCCGTAAAA ACCGGAACAG CTCAGATGGC AAATGAGAAA 
GGCGGGGGCT ACAGTAAGAC CGATTTTATT TCAAGCTGTA TAGGAATTTT TCCGGCAGAT 
GACCCAAAGA TTATTTTGTA TACGGCAGTC ATAAAACCTG TCGGACAAAT ATACGGCTCC 
GTTATTGCGG CTCCCGTAAT TTCCGAGGCC TCGAACGAAA TTATAGATTA TCTCGGACTT 
GCAAGAGAAA ACGCTCCTAC CGTTGAACAC ACCGGGCGGA TTCCCATAAG CGAAAATAAA 
CCTGTCGTTT TAAAAGATAA GATGCCCGAC TTAACGGGCG TTCCTAAAAA ACTTTTGCTT 
GAGCTTCTTT TACAAAAAGA CTTTTCGGTA AAAATTACAG GTGACGGATA TGTCGTCTCT 
CAAACTCCTC CGCCCGGAAC ACCTCTTAAA AAAGGAATGA AAATTGAGCT CAATCTCGAA 
TAA 

 

Protein sequence

MEEVDSFISK PRFWFFISLV IIFVVLLILQ FAKYMIMKEP IVITPKVSTE RGTIYDRNKK 
ILAVQTTIYN LYADKTLMKN PAEAAKVLAP VLMQNESDLL EKIQDSKSNF LYLKKRMSES 
ERDLVKNVID ENKLSGIRFE SVFNRTYPEN TLASTVVGFL GDDGRGKTGV EYSLQNILSP 
PPETKGYTGK GYDVYLSIDG NIQYMLEKII SKTMEETKAQ SAVFLAVDAK TGEVLAYVNS 
PSASLANFIE STPEQRLDRP ANYVYEPGSV FKIFSMAAFL ELGTTKDGQV YDCNALFEFN 
RPNVKPITCL KTHGRVSPRD IIRLSCNDAT AQIADITEKN AFYEKIKLFG FGSKTNIELP 
GESAGLLAPP QNWSIRTKHT IAIGQEIGVS ALQLVEAATA FTNKGYTLRL SLISKVADKE 
GNIVYLHKPS VLNKVISEKN ADLLLSYMRT GSIEGIAWRA SINGVPIAVK TGTAQMANEK 
GGGYSKTDFI SSCIGIFPAD DPKIILYTAV IKPVGQIYGS VIAAPVISEA SNEIIDYLGL 
ARENAPTVEH TGRIPISENK PVVLKDKMPD LTGVPKKLLL ELLLQKDFSV KITGDGYVVS 
QTPPPGTPLK KGMKIELNLE