Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1243 |
Symbol | tlyC |
ID | 2741185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1275175 |
End bp | 1275951 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637160121 |
Product | hemolysin C |
Protein accession | NP_971850 |
Protein GI | 42526752 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.419025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTATAA TAGACTTATT TAAAAAGAAG GGTAATGTAA ACAATATTCT AAAAGAAGGA TTAAACGAGG AAAAAAGGGA TATGATCCGC GGCGTTGTCG ACTTATCCGA TACGGCTGTA AAAGAGGTTA TGATTCCGCG TATAGATGTT GATTTTTTAG CCCTTGATAC GCCTAGCGAT GAAATTTTAG ACAGGATATC GGAAAGCGGC CACTCCCGTT TTCCCGTATA TGATGAGTCA ATCGATAATG TTATAGGTAT TCTTTATGTT AAGGATATAA TAAAACTTTT GACAAAGAAT CAAAAAATTG AGCTTGATAA GATAGTGCGC CGAGCATTTT TTGTTCCTGA ATCAAAAAGA ATTGACGCTC TTTTAGCCGA ATTTAAAAGA CGCCATATTC ATATTGCCGT TGCCGTTGAT GAATACGGCG GTGTTTCAGG TATTGTATGT ATGGAAGACA TCATAGAAGA GATTGTAGGC GATATACAGG ATGAATTTGA CAATGAGGGT GAGGATATTA CCGAAATCGC CCCGGGTGTC TGGCTTTGCG ATGCCCGTGT CGATCTGGAC GACCTTGCCG AAACCATTAA AAGCGATGAC TTACCTGTAG ATGAGTTTGA AACATTGGGC GGTTTTGTGT TCGATCTTTT CGGAAAAATA CCTGCCAAAT ATGAAAAAAC AGCTTGGAAT GATTTTGACT TTATTGTTCA GGATATGGAC GGACATAAGG TTAAGACCGT TAAAATTGTC CACAACAAAA ATTCTATGCA AAATTAG
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Protein sequence | MGIIDLFKKK GNVNNILKEG LNEEKRDMIR GVVDLSDTAV KEVMIPRIDV DFLALDTPSD EILDRISESG HSRFPVYDES IDNVIGILYV KDIIKLLTKN QKIELDKIVR RAFFVPESKR IDALLAEFKR RHIHIAVAVD EYGGVSGIVC MEDIIEEIVG DIQDEFDNEG EDITEIAPGV WLCDARVDLD DLAETIKSDD LPVDEFETLG GFVFDLFGKI PAKYEKTAWN DFDFIVQDMD GHKVKTVKIV HNKNSMQN
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