| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1096 |
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| Symbol | ispH |
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| ID | 2740226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1131129 |
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| End bp | 1131998 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637159970 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | NP_971704 |
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| Protein GI | 42526606 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.399058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGTAA AACGTGCGGA AGTTTTAGGT TATTGTTCCG GAGTACGCAG AGCTGTTGAT
ACGGTTCTTA AACTAGCGAA AGAAAATACT GAAAATAAAT CCGGCCTTTA TACCTTCGGA
CCATTGATTC ATAATCCTTC TACAATGTTA CGGTTAAAAC AAATGGGTGT AAGAACTATT
GACACTGAAA ATTTTACCGA AGATGAAGAC TATAAAGATT CCGTTATCGT AATAAGGGCT
CACGGTATTC CTCCGTCAAA AAAAAGCGAG CTTGAAAAAA GCGGGGCTAA GGTGATAGAT
GCAACATGCT CCAGAGTAAA GGCAAGTCAG GCCCTTGCAA AAAAACATTC TGAAGAAGCC
TTTGTTATTT TAGCCGGAGA TAAAAACCAC GGAGAACTTA TAAGCATTGC AGGTTATGCG
GAAGGAAAAT GCTTAATCGT TCAAAATGCC GAAGAAGCCG CTTTAATAGA TTTACCTTCT
TCTTTGAGTG CAAATGGGAG TGCCGTTTTA ATTGCCCAAA CGACGATTAA GGAATCGGAA
TATGAAGCAA TAGCTTCGGC TTTGAAGAAA AGGATTTCCG ATTTAAAGGT CTTTAATACG
ATTTGTCCTG CAACCTCCGA TCGGCAGGCT GCCTTAAAAA AATTAGCTTA TGAAGTTGAT
GCACTTTTAG TTATAGGCGG GAAAAATTCT GCAAACACAA AAAGGCTTTT TCAAACCGCC
GTTGACACAA AAAAGCCTGC ATGGTTAATC GAAGATGCCT CTGAAATACC GAAAGAGATT
TTTTCTTATT CAGTGATAGG TTTAACTGCC GGTGCTTCAA CTCCCGATTT TATAATCGAT
GAGGTAGAAA AAAAATTACT TGAGGGATAA
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| Protein sequence | MVVKRAEVLG YCSGVRRAVD TVLKLAKENT ENKSGLYTFG PLIHNPSTML RLKQMGVRTI
DTENFTEDED YKDSVIVIRA HGIPPSKKSE LEKSGAKVID ATCSRVKASQ ALAKKHSEEA
FVILAGDKNH GELISIAGYA EGKCLIVQNA EEAALIDLPS SLSANGSAVL IAQTTIKESE
YEAIASALKK RISDLKVFNT ICPATSDRQA ALKKLAYEVD ALLVIGGKNS ANTKRLFQTA
VDTKKPAWLI EDASEIPKEI FSYSVIGLTA GASTPDFIID EVEKKLLEG
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