Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1095 |
Symbol | alr |
ID | 2740225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1129966 |
End bp | 1131105 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637159969 |
Product | alanine racemase |
Protein accession | NP_971703 |
Protein GI | 42526605 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.885061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGCGA CAAAGGCTAT TATCCATTTG GATAACTTAC AATATAACAT TAAAGAAATA AAAAAGCGGC TTAACAAGAA TGTAAAGATT TGTCTTCCGG TCAAGGCCGA TGCCTATGGG CATGGGGCTG TGAGGGTTGC GGTTGCAGCA ATAAGGGCAG GCGTTTCTTA TTTGGCTGTT GCCTCCATTC AGGAAGCTGT CGAATTAAGA GAGGCCGGTA TTGTAGCCCC GATTATTTCT TTAAGTCTTC CCGTGCTTGA AGAAATTCCT GAGCTTTTAA AATACGATAT TGAGCCCTTG GTTATAGATG AGGAGTTTAT AAACGATTTA AACCGTTTTG CAAAAAAACT AAATAAAAAA GCCTGGGTTC ATCTTAAAAT AGATACCGGA ATGCGCAGGA TAGGCTGCTC GCCTATGGAA GCCGTTAAAC TTGCGGTACA GATAGACCGT GCAGAAAATC TTGAGCTAAA AGGAGTGTGT ACGCATTTCG CTGTTTCCGA TTCTACCGAT GAAAAAAATA TTAAATTTAC AAAAAAACAG ATTTCTGTTT TTAAGGACTC AATAAAAGAA ATAAAAAAAG CGGGGATTAA TCCCGGATTA ATTCATGCCG CAAATTCAGG ATCTGTTCTT CAATATCCCG AAGCCCAGTT CGATATGGTG CGTCCGGGAA TCTTGGTCTA CGGTTATGCA CCCTCTCCAT CCCTAAATTC TTTAATAGAT TTAAAGCCTG TAATGGAGCT TGTTACACAG GTAGTGCTTA TCAAAAAAAT TGAAAAGGAT ACAAGCGTTT CTTATGATAG ATGTTGGACA GCCGAAAAAG AAACATTTGT TGCAACCCTT CCTATAGGCT ATGCGGACGG ACTCATGCGT TCCCTTAGCG GATTAAAAGT GAGAATAGGA AAAGATTTTT TTCCGATCAT CGGACGCATT TGTATGGATC AATGTATGAT AGATATAGGC GCTTCTCCAT GGGTTCAAAG ATGGGATGAG GTTTGTATCT TCGGTCCTGT TTCAAAAGAA CATCCTAAAA ATAATACGGC CCAAGATCTT GCAAAAATTG CCGGAACTAT TCCTTATGAG CTGACATGCG ATATAAACAA AAGAGTTCCG CGTATTTTTA TTGATGAAAC CATACAATAA
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Protein sequence | MRATKAIIHL DNLQYNIKEI KKRLNKNVKI CLPVKADAYG HGAVRVAVAA IRAGVSYLAV ASIQEAVELR EAGIVAPIIS LSLPVLEEIP ELLKYDIEPL VIDEEFINDL NRFAKKLNKK AWVHLKIDTG MRRIGCSPME AVKLAVQIDR AENLELKGVC THFAVSDSTD EKNIKFTKKQ ISVFKDSIKE IKKAGINPGL IHAANSGSVL QYPEAQFDMV RPGILVYGYA PSPSLNSLID LKPVMELVTQ VVLIKKIEKD TSVSYDRCWT AEKETFVATL PIGYADGLMR SLSGLKVRIG KDFFPIIGRI CMDQCMIDIG ASPWVQRWDE VCIFGPVSKE HPKNNTAQDL AKIAGTIPYE LTCDINKRVP RIFIDETIQ
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